Saccharothrix espanaensis: BN6_04940
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Entry
BN6_04940 CDS
T02404
Name
(GenBank) Type III restriction protein res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sesp
Saccharothrix espanaensis
Pathway
sesp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sesp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BN6_04940
09124 Replication and repair
03420 Nucleotide excision repair
BN6_04940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sesp03021
]
BN6_04940
03400 DNA repair and recombination proteins [BR:
sesp03400
]
BN6_04940
Enzymes [BR:
sesp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN6_04940
Transcription machinery [BR:
sesp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BN6_04940
DNA repair and recombination proteins [BR:
sesp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BN6_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CCH27825
UniProt:
K0JNV1
LinkDB
All DBs
Position
complement(507281..508942)
Genome browser
AA seq
553 aa
AA seq
DB search
MTDGPLIVQSDKTLLLEVGHPLSEDARTAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVRFSRYPVPQPLLVDVVDTMGRFGRLQLANHPAHGLVLSSVDRAVLEEVL
RHKKIKPMLGERLDDDTVVVHPSERGRLKQILLKVGWPAEDLAGYVDGEAHPIDLVEDGW
QLRDYQRLAAQAFWAGGSGVVVLPCGAGKTLVGAAAMAEAGATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGERKEIRPVTIATYQVITRKSKGEYKHLELFDSRDWGLIVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGQEGDVFSLIGPKRYDVPWRDIEAQGWIAP
AECTEVRVTLTDNERLEYAIAEPDERYKLCSTARTKLPVVRAILDRHPDEPTLVIGAYLD
QLESLGEALDAPIIQGSTKNKEREQLFDAFRRGELRVLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSVVSRDTLDTDYAAHRQRFLAEQGYAYKIVD
ADDLLGPKLPEVG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggccctttgatcgtccagtcggacaagaccctgctgctggaggtcggccac
cccctctcggaggacgcgcgcaccgcgatcgcgccgttcgccgagttggagcgcgccccc
gagcacgtccacacctaccgggtcacaccactcgcgctgtggaacgcgcgcgccgccggg
cacgacgccgagcaggtcgtcgacgccctggtgcggttctcccgctaccccgtgccgcag
ccgctgctggtggacgtggtcgacaccatgggccggttcggccggctccagctcgccaac
caccccgcgcacggcctggtgctcagctcggtggaccgcgccgtgctggaggaggtgctg
cggcacaagaagatcaagccgatgctcggcgagcgcctggacgacgacacggtggtcgtg
caccccagcgagcgcggccggctcaagcagatcctgctcaaggtcggctggcccgccgag
gacctggcgggctacgtcgacggcgaggcgcacccgatcgacctggtcgaggacggctgg
cagctgcgcgactaccagcggctggccgcccaggcgttctgggcgggcggctcgggcgtc
gtggtgctgccgtgcggcgcgggcaagacgctggtcggcgcggcggcgatggccgaggcg
ggcgcgaccacgctgatcctggtgaccaacaccgtcgcgggccggcagtggaagcgcgag
ctggtcgcccgcacgtcgctgaccgaggacgagatcggcgagtactccggcgagcgcaag
gagatccgcccggtcaccatcgcgacctaccaggtgatcacccgcaagtcgaagggcgag
tacaagcacctggagctgttcgactcgcgcgactggggcctgatcgtctacgacgaggtg
cacctgctgcccgcgccggtgttccggatgaccgccgacctccagtcccgccgccggctc
ggcctgaccgcgaccctggtccgcgaggacggccaggagggcgacgtgttctcgctgatc
gggcccaagcggtacgacgtgccgtggcgcgacatcgaggcgcagggctggatcgcgccc
gccgagtgcaccgaggtccgggtcacgctcaccgacaacgagcggctggagtacgccatc
gccgagccggacgagcgctacaagctgtgctccacggcccgcaccaagctgcccgtggtg
cgcgcgatcctggaccggcaccccgacgagccgaccctggtgatcggcgcctacctggac
cagctggagtcgctgggcgaggcgctggacgcgccgatcatccaggggtcgaccaagaac
aaggagcgcgagcagctcttcgacgcgttccggcgcggcgagctgcgggtgctggtggtg
tcgaaggtggcgaacttctccatcgacctgcccgaggcgtcggtggcggtgcaggtgtcg
ggcacgttcgggtcgcgccaggaggaggcgcagcggctgggccggctgctgcggcccaag
ggcgacgggcggcaggcgcacttctactcggtggtctcccgggacaccctggacaccgac
tacgccgcccaccgccagcggttcctcgccgagcaggggtacgcgtacaagatcgtcgac
gcggacgacctgctcgggccgaagctgccggaggtcggctga
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