Saccharothrix espanaensis: BN6_08180
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Entry
BN6_08180 CDS
T02404
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sesp
Saccharothrix espanaensis
Brite
KEGG Orthology (KO) [BR:
sesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sesp03400
]
BN6_08180 (sbcC)
DNA repair and recombination proteins [BR:
sesp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN6_08180 (sbcC)
Archaeal homologous recombinant proteins
BN6_08180 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
TsaE
AAA_22
NACHT
AAA_21
nSTAND3
Nup88
Motif
Other DBs
NCBI-ProteinID:
CCH28147
UniProt:
K0JRV1
LinkDB
All DBs
Position
825682..828567
Genome browser
AA seq
961 aa
AA seq
DB search
MKLHRLSVSAFGPYPGREEVDFDLLGADGLFLLHGDTGAGKTTLLDAVAFALFGKVPGAR
GQVKRLRCDYADRDTPTEVELELTVRGRRFRVVRSPEYDRPKKRGDGVTRQQAKVSLTWL
AGWHGEGHTRIDDVAREVESLLGMTAEQFFQVVLLPQGEFANFLRAETAEREKLLEKLFG
TERFLDVEKWFRERRKAKGRELDELGRANRDLVQRVAEVAGEDPPADGGDPEWLSSLLKR
LDEVNLEAQARAALAAGSLGRAETAWRQTQELADRVRRVRRARADLARCAEAEPRRAAWE
RERDAARRAAVVVPAQERVRRLEQAADRVLAQARAAADAVEAFGHPVSGTDLRADGERLR
EEAGGLTALADEARRQQEDRRRLDELARREEQAAGRLTTLVTALAEVPDRLAAARAAAEE
SALAVARLESVAARAAAARDLPGAERLLRTADDARRVAVDAHQKAKDVLLQVRQQRLDGM
AVELAAELRAGRSCPVCGSAEHPRPAEPMLDAVTAADEERATAVEQTALDRRTAAEKAFQ
DAASRVTTLREVVGEHDPAALIAEHRSLDTVASQRDARSGALAALERKVEAATRDRAALE
RETAELAASRRELAEAVRERADRLEEARGEFADVTARRAHLLDLSDALAALAERRAAVAE
HRERLAEQQVEVSGLAAGAGFADVAEALAAARPESAVAELDVRIRQVEDVRVAAEAVLAE
LPDVDPAAEIDLPAAETRYRAARDQAEQAANGRADAGRRLARTSELAERLSAAWVRLEPV
ATAYAELDALTDVINGQGQNANRMTLRTYVLAARLEEVAVAASARLERMSQGRYRFVHSV
EAGPRGTRGGLGLDVLDDYSGQQRPAKTLSGGESFLASLALALGLSDVVSAGAVLDTLFI
DEGFGTLDAGALELVMSTLDELRAGGRVVGLVSHVEELRQRIPTRLRVRKARGGSSLEVV
A
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgcaccggctgtcggtgagcgcgttcggcccgtacccgggacgtgaggaggtc
gatttcgacctgctcggcgcggacgggctgttcctgctgcacggcgacaccggcgcgggc
aagacgacgctgctcgacgcggtggcgttcgcgctgttcggcaaggtgccgggcgcgcgc
ggccaggtgaagcggctgcgctgcgactacgccgaccgggacacgccgaccgaggtggag
ctggagctgaccgtgcgcggccggcggttccgggtggtgcgcagcccggagtacgaccgg
ccgaagaagcgcggcgacggcgtgacccggcagcaggcgaaggtgtcgctgacctggttg
gcgggctggcacggcgaggggcacacccgcatcgacgacgtggcccgcgaggtcgagtcg
ctgctcgggatgaccgccgagcagttcttccaggtggtgctgctgccgcagggcgagttc
gcgaacttcctgcgggcggagaccgccgagcgggagaagctgctggagaagctgttcggc
accgagcggttcctggacgtggagaagtggttccgggagcggcgcaaggccaaggggcgc
gagctggacgagctcggccgggccaaccgcgacctggtgcagcgggtggccgaggtcgcg
ggcgaggacccgccggccgacggcggcgacccggagtggctcagctcgctgctcaagcgg
ctggacgaggtgaacctggaggcgcaggcgcgggccgcgctggccgccgggtcgctgggg
cgggccgagacggcgtggcggcagacccaggagctggccgaccgggtgcggcgggtgcgt
cgcgcgcgagccgacctggcgcgctgcgccgaggccgagccgcgccgggcggcctgggag
cgggagcgcgacgcggcgcgccgggcggcggtcgtggtgcccgcgcaggagcgcgtgcgg
cggctggagcaggccgcggaccgggtgctggcgcaggcgcgggcggcggcggacgccgtg
gaggcgttcggccacccggtgtcgggcacggacctgcgcgcggacggcgagcggttgcgc
gaggaggcgggcgggctgaccgcgctggccgacgaggcccgccggcagcaggaggaccgg
cgccggctggacgagctggcccggcgcgaggagcaggccgccgggcggctgaccacgctg
gtcaccgcgttggccgaggtgccggaccggctggccgccgcacgggccgccgccgaggag
tccgcgctggccgtcgcccggctggagtcggtggccgcacgggccgccgccgcccgtgac
ctgccgggtgccgagcggctgctgcgcacggccgacgacgcccggcgggtggccgtcgac
gcccaccagaaggccaaggacgtcctgttgcaggtgcggcagcagcggctggacggcatg
gccgtggaactcgcggcggagctgcgcgcgggccggtcgtgcccggtgtgcggctcggcc
gagcacccccgcccggcggagccgatgctcgacgcggtgaccgccgcggacgaggagcgc
gccaccgccgtcgaacagaccgcgctggaccgccgcaccgccgccgaaaaggcgttccag
gacgcggcgagccgcgtgacgaccctgcgcgaggtggtcggcgagcacgacccggcggcc
ctgatcgccgaacaccggtcgctggacactgttgcctcccaacgggatgcgcgttccggc
gcgctggccgcgctggagcgcaaggtggaggcggcgacccgggaccgcgcggcgctcgaa
cgcgagaccgccgagctcgccgcgagccggcgggagctggccgaggccgtccgggagcgc
gccgaccgcctggaggaggcgcgcggcgagttcgccgacgtgaccgcccggcgggcccac
ctgctcgacctgtccgacgcgctggccgcgctcgccgagcgccgcgccgccgtcgccgag
caccgggaacggctcgccgagcagcaggtggaggtgtccgggctggccgccggggcgggc
ttcgccgacgtggccgaggcgctggccgccgcccggccggagtccgccgtggccgagctg
gacgtccggatccgccaggtcgaggacgtgcgggtggccgccgaggcggtgctggccgag
ctgcccgacgtggacccggcggccgagatcgacctgccggccgccgagacccgctaccgc
gccgcccgtgaccaggctgaacaggccgcgaacgggcgggccgacgccggtcggcggctg
gcccggaccagcgagctggccgagcggctctccgccgcgtgggtgcggttggagccggtc
gcgacggcgtacgcggagctggacgcgctgaccgacgtgatcaacggccagggccagaac
gccaaccggatgacgttgcgcacctacgtcctggccgcccggctggaggaggtcgcggtc
gccgccagcgcccggttggagcggatgagccaggggcgctaccggttcgtgcactcggtc
gaggccggcccgcgcggcacccgcggcggcctcggcctggacgtgctggacgactactcg
ggacagcagcgcccggccaagacgctctccggcggcgagtcgttcctggcctcgctggcg
ctcgcgctcggcctgtccgacgtggtgtcggccggtgcggtgctggacacgctgttcatc
gacgaggggttcggcaccctcgacgcgggcgcgctcgaactcgtcatgtccactttggac
gaactgcgcgcgggcgggcgcgtggtcggcctggtgtcgcacgtggaagagctgcgccag
cgcatcccgacccggttgcgggtgcgcaaggcgcgcggcggctcgtcgctggaagtcgtg
gcctga
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