Saccharothrix espanaensis: BN6_09350
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Entry
BN6_09350 CDS
T02404
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sesp
Saccharothrix espanaensis
Pathway
sesp03420
Nucleotide excision repair
sesp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sesp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN6_09350
03430 Mismatch repair
BN6_09350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sesp03400
]
BN6_09350
Enzymes [BR:
sesp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN6_09350
DNA repair and recombination proteins [BR:
sesp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN6_09350
MMR (mismatch excision repair)
Other MMR factors
BN6_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCH28265
UniProt:
K0JP54
LinkDB
All DBs
Position
942600..946127
Genome browser
AA seq
1175 aa
AA seq
DB search
MAVPGGDRERAGEAEHLAGPFEVAEALGLPKPTPEQAAVVAAPTAPALVVAGAGAGKTET
MAARVVYLVANGFVTPDRVLGLTFTRKAARQLSERVRTRLRRLGGSPLLDRLDPSGERRA
AVLTTEPVILTYHAYAGRLVGEHGLRLPVEPGVRLLTETASWQLAHRVVSTWAEDIDTDK
VPATVTGYLLALAGELGEHLVEPTDLRKNAEWLTTVIESAPKTARQRDALPEKLKDIVNA
QRLRVNLLPLLEAYQARKRREAAMDFADQMSLAARLASEYPEVVRGERERYGAVLLDEYQ
DTGHAQRVLLRSLFGQGEPMAVTSVGDPAQAIYGWRGASAANLPRFVHDFPPARKYGLLT
SFRNPPEVLALANAVSEPLRASGLDVEELRARPGAGPGDVRIGLFPDVRAELGWMADTVA
AQWAAHLDSSDEPPTAAVLVRRRADMAAIAAALRERDLPVEVVGLGGLLDEPEVRDLTSA
LRVLVDPLAGTAAARLLTGSRWRVAAVDLAALWQRARELAGAPSRQSVVDDPLAVLADAL
PGEHAEQAGLADALDDPGDPTAYSAEGYRRVRRLGAELSSLRRRLEQPLPELVADVERTL
LLDIEAMARPGGVGRSHLDAFADVVADFAAASPSATLPALLDYLYTAEHAEDGLEPGEVE
VAENRVQVLTMHSAKGLEWHIVAVPHVVKDVFPGRKKTSCWLKAVAELPAELRGDAADLP
KLRIPGGSNRKEVEEALDRHADDFEDRRLVEERRLLYVALTRSEHSLLVSGHWWAETGDK
PKGPSTFLAELRESVLAADHPPADIAHWAPPPAEDEPNPLASQVKSADWPADPLGKRRAA
VAEGAALVRAALDRHLSAPPPPTPTPTPPHPVTPAAQPPDDLPPDDLPPEPPDGLPPEPP
DDYDLPPEPDDHDPGGEFDLPADPTPDLEAPTDLEESREPGAPEQLGESADDPEGWARDV
DVLLAERAAAADRRERVVLPDHLSVSQLVELAADPDQLARRLRRPLPFPPNPLARRGTAF
HTWLEQRFGATRLLDLDELPGAADEGASPDSDLGRLQEAFLTSAWADRTPHDVEVPFEAE
IDGMSVRGRMDAVFADPDGGWTVVDWKTGAVPEEERLPALSVQLAAYRLAWAALSDTPVE
RVRAAFHYVRHDHTLRPADLLDAAGLRALIRSVPT
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtggcagtgccgggtggtgatcgggaacgagcgggcgaggcggagcacctggccggcccg
ttcgaagtcgccgaagccctcggcctgcccaaaccgacgcccgagcaggccgccgtcgtc
gccgccccgaccgccccggcgctggtggtggccggtgcgggcgccggcaagaccgagacc
atggccgcccgcgtcgtctacctggtcgcgaacggcttcgtcacccccgaccgcgtcctg
ggcctgacgttcacccgcaaagccgcccgccagctctccgaacgcgtccggacccggctc
cgccggctcggcgggtcgccgctgctcgaccgcctcgacccgagcggtgaacgccgcgcc
gccgtcctcaccaccgagccggtcatcctgacctaccacgcctacgcgggccgcctggtc
ggcgagcacggcctgcgcctgccggtcgagccgggcgtccggctgctcaccgagaccgcg
tcctggcagctcgcgcaccgggtcgtctcgacgtgggcggaggacatcgacaccgacaag
gtcccggccaccgtcaccggctacctgctggcactggccggcgaactcggcgagcacctc
gtcgaacccaccgacctgcgcaagaacgccgagtggctgaccaccgtgatcgagtccgcc
cccaagaccgcgcgccagcgcgacgccctgcccgagaagctgaaggacatcgtcaacgcc
cagcgcctgcgggtgaacctgctgccgctgctggaggcataccaggcccgcaaacggcgt
gaggcggcgatggacttcgccgaccagatgtccctggccgcccggctggccagcgagtac
ccggaggtcgtgcgcggcgagcgggagcgctacggcgcggtcctgctcgacgagtaccag
gacaccggccacgcccagcgcgtgctgctgcggtccctgttcggccagggcgagccgatg
gccgtcacgtccgtcggcgacccggcccaggccatctacggctggcgcggcgcgtcggcg
gccaacctgccgcgcttcgtccacgactttccgcccgcccgcaagtacggtttgctgacc
agcttccgcaacccgccggaggtgctcgcgctggccaacgccgtgtccgagccgctgcgc
gcgtccggcctggacgtggaggagctgcgggcccgtcccggcgcgggccccggtgacgtc
cgcatcggcctgttccccgacgtccgcgccgaactcgggtggatggcggacaccgtcgcc
gcccagtgggccgcgcacctggactccagcgacgagccgcccaccgccgccgtgctggtc
cgccgccgcgccgacatggccgccatcgccgccgccctgcgcgaacgcgacctgccggtc
gaagtggtcgggctcggtggcctgctggacgagcccgaggtccgcgacctgaccagcgcc
ctgcgcgtcctggtcgacccgctggccggcaccgccgccgcccgcctgctcaccggctcc
cgctggcgggtggcggccgtcgacctggccgcgctgtggcagcgcgcccgcgaactcgcc
ggggcacccagccggcagtcggtggtggacgacccgctggccgtcctcgccgacgcgctg
ccgggcgaacacgccgaacaagccggcctggccgacgccctggacgacccgggcgacccg
accgcgtactccgccgagggctaccgccgggtccgccggctcggcgcggaactgtcgtcc
ctgcgccggcggctggagcagccgctgcccgaactcgtcgccgacgtcgagcggaccctg
ctgctcgacatcgaggcgatggcccggccgggcggcgtgggccggtcacacctggacgcg
ttcgccgacgtcgtcgccgacttcgcggcggccagcccgtcggccaccctgcccgcgctg
ctggactacctgtacaccgccgagcacgccgaggacggcctggaaccgggcgaggtcgag
gtggccgagaaccgggtgcaggtgctcaccatgcactcggcgaagggcctcgaatggcac
atcgtcgccgtgccgcacgtggtgaaggacgtgttcccgggccggaagaagacgtcgtgc
tggctgaaggcggtcgccgaactgcccgccgaactgcgcggtgacgccgccgacctgccg
aagctgcgcatccccggcggcagcaaccgcaaggaggtcgaggaagcgctggaccgccac
gccgacgacttcgaggaccgccgcctggtcgaggagcgccggctgctctacgtcgcactg
acccggtccgagcacagcctgctggtgtccggccactggtgggccgagaccggcgacaag
cccaagggcccctccacgttcctcgccgaactgcgcgagtccgtcctggccgccgaccac
ccgcccgccgacatcgcccactgggcacccccgccggccgaggacgagcccaaccccctc
gcgtcccaggtgaagtcggccgactggcccgccgacccgctgggcaagcgccgcgccgcc
gtggccgaaggcgccgccctggtccgcgccgccctggaccgccacctgtcagccccaccc
ccgcccaccccgacgcccaccccgccccaccccgtcacacctgccgctcagccccccgac
gacctccccccggacgacctcccgccagagcccccggacggcctcccgccagaacccccg
gacgactacgacctcccccccgaaccggacgaccacgaccccggcggcgagttcgaccta
cccgcagaccccacccccgacctcgaagccccgacggacctcgaagagtcgcgggaaccc
ggtgcaccggagcagctcggcgaatcggccgacgacccggaaggctgggcgcgggacgtc
gacgtgctgctggccgaacgcgccgccgccgcggaccgccgcgaacgggtcgtgctgccc
gaccacctctcggtgagccagctggtcgaactcgccgccgacccggaccagctggcccgc
cggctgcgccgcccgctgccgttcccgccgaacccgctggcccggcgcggcacggccttc
cacacctggttggaacagcggttcggcgcgacccggctgctcgacctggacgagctgccc
ggcgcggcggacgagggcgcgtcccccgactccgacctgggccggctccaagaggcgttc
ctgaccagcgcctgggccgaccgcaccccgcacgacgtggaggtgccgttcgaggccgag
atcgacgggatgtcggtgcgcgggcggatggacgcggtgttcgccgacccggacggcggc
tggaccgtcgtggactggaagaccggcgcggtgcccgaggaggaacggctgccggcgctg
tcagtgcagctggcggcctaccggctggcctgggccgcgctgtcggacaccccggtcgag
cgggtgcgggcggcgttccactacgtccggcacgaccacacgctccgccctgccgacctg
ctcgacgccgccggcctgcgcgccctgatccgctcggtaccgacctga
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