Saccharothrix espanaensis: BN6_28060
Help
Entry
BN6_28060 CDS
T02404
Name
(GenBank) hypothetical protein
Organism
sesp
Saccharothrix espanaensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7927
CLIPPER
CLIPPER_2
DUF7933
CARDB
GBS104-like_Ig
DUF7619
NPCBM_assoc
Dynein_IC2
Motif
Other DBs
NCBI-ProteinID:
CCH30118
UniProt:
K0K0Q4
LinkDB
All DBs
Position
2973960..2979644
Genome browser
AA seq
1894 aa
AA seq
DB search
MSLFARLGRGRGVVARLVAVAIAATLVTAPAAAAATWEVEGENDPSTFDCDHLYYSNYLS
GMQFENDASGEPTIDNTVISKRVGSGLPAYWSTSMALGKDPDSGNVAAFYANYTTSNLTL
YKHVSGTNTVTDEIAGGQGRQLPGGTNWGGIAADPAAGALYGAQNGGVPKLFRMDLATGA
TQEWTRGVNLTSVPPDDPVFTGGSMVPDMFVDSNGGAYYGISYGGSSYVYRLDPATGTTT
QAVHVTGPASANGFNNYGMAYAHNAIYLGLYSGALYKVDPVTGVSEQVAGGNAHQNQVGR
IESEPGGTWPITDLAACRIAPDLTKKIVVAKTADQTDARPGDKVTYTVTVRNTGTGPASG
VSVVDDLTGVLDDATYNNDAVAVGPSTQPVYDGTAQNLTWTGDIDAGATVTITYSVTVGT
PPGGDKTLRNTVTSPDGNCSAGCSTEVPIALLRLKKASAPADPKPGSTITYTVTATNDGT
APWTGATFTDDLTGVLDDAAYNNDATASSGAVGYDAAGRKLTWTGDVPAGSTVTVTYSVT
VGSPPAGDKRLTNAVVGPDGTNCSRGSTDPDCRTDEPITGLVIRKTAAPATVKPGDTVTF
TITAENVGGAAVTGATLTDDLTGVLDDADYQADAVARVGGTNAPTQPTFDAGTRKLTWTG
DVGVGQTVTITYTATVKAPPTGDFSLVNTVTGPDGSTCPPGSTDPACGSVTPVGAVTVRK
TADKATATPGERVTYTVTVVNTGQADYPGATFADDLTGVLDDATWDDQITADIGTATFDA
GAKRLTWTGDVAKGATATITYSVTVGNPPAGDKRLRNVVTGPNCPAGSTDPACGTETLVR
SVKLVKTGSPANPKVGDVVTYTVVVTNTGTAAYGGASFVDDLSDVLDDATWDGNTTATVG
AVVFDAAGQKLTWTGDLAVGATATVTYTVTVTNAGDQFLRNVVSGDGSNCPPGSDDPDCQ
VVLPKPQLGIVKSVSATSVKPGEVVTYTVTVTETSGNAGYPGASFTDDLAGVLDDASWNG
DATASSGSVTFDAGAKTLAWQGDVAAGATVTITYKVTVGTPPGGDKKLRNAVTGPEDSTC
PPGGDCGTDTPVALLEIKKTTAPTTPKAGDTVTFTVVVSNTGEADYLGASFSDDLSGVLD
DAVWNGDATATSGTATLDAGAKTLAWNGDVAKGGTVTVTYSVTVGRPPGGDRQLRNAVTG
PDGATCPPGSTDPDCSTVTPLALLELAKTASPATAKPGEKVTYTVTVRNPGTATYVGATF
SDDLTGVLDDATYNGDATAGAGSVTYAAPNLTWRHDLPAGTTVTVTYSVTVASPPAGDGE
LRNAVTGPTDSTCQGDCGTVTPVAALRIVKSVAPTDPRPGDEVTYTVLVTNTGKATYAGA
TFTDDLSGVLDDARYNQDAQATVGAVAYAAPVLTWNGDIGAGAEVRVTYSVTVNRPPGGD
KLLKNAVTGTSDGNCPPGSTDPDCGTVTPVPALKLVKTGTPNDPKTGDTVTYTVTVTNVG
EAAHPAATFTDDLTGVVDDATYNGDASASAGAVSYAAPKLTWTGALAKGTTATVTYSVTV
TNVGDKRLSNVVTSDGSNCEPGSDDPDCRSTLPLPKLSIRKSATPDAVPAGGTVTYRVVV
ANTGEAPYRGATFSDDLTGVLDDASYNNDAAASAGAVTYAAPVVTWTGDVPAGAEITVTY
TVVVGTPPAGDSFLRNAVTSPDNTNCPLPMPALFTRAAGPIDPACATETPIQALTMRKVA
DPAPTVAPGGTVRYTVTVHNTGTALYEQAELTDDLAEVLDNAAYDNNVKADTGTVTVTGT
VLRWQGRLAPAQLATITYSVTVHVDATGSLRNTVVSTTPGANCKPERPDCTTKTDVTATR
PPLADTGARVLELLLAALALLAMGVLLVLRGRRT
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttcgcccggctgggtcggggacgcggggtggtcgcccgactcgtggcggtg
gcgatcgcggcgacgctggtgaccgcgccggcggccgccgccgctacctgggaggtcgag
ggcgagaacgacccgtccaccttcgactgcgaccacctgtactacagcaactacctgtcc
gggatgcagttcgagaacgacgcgtccggcgagccgaccatcgacaacacggtgatcagc
aagcgggtcgggtccgggttgccggcctactggtcgaccagcatggcgctgggcaaagat
ccggacagcgggaacgtggcggcgttctacgcgaactacaccacctcgaacctgacgctg
tacaagcacgtctcgggcaccaacacggtgaccgacgagatcgccggcggccaggggcgc
caactgcccggcgggacgaactggggcggcatcgccgcggaccccgcggccggcgcgctg
tacggggcgcagaacggcggcgtgcccaagctgttccggatggacctcgcgaccggtgcg
acgcaggagtggacgcgcggggtcaacctgacgtccgtgccgcccgacgacccggtgttc
accggcgggtcgatggtgccggacatgttcgtggacagcaacggcggcgcgtactacggc
atctcctacggcggctcgtcctacgtgtaccggctggacccggcgacggggacgacgacc
caggccgtgcacgtcaccgggcccgcgtccgccaacggcttcaacaactacggcatggcg
tacgcgcacaacgccatctacctcggcctgtactccggcgcgctctacaaggtcgacccg
gtgacgggggtgtcggagcaggtcgcgggcggcaacgcgcaccagaaccaggtcgggcgg
atcgaatccgagcccggtggcacgtggccgatcaccgacctcgccgcgtgccgaatcgcg
ccggacttgacgaagaagatcgtggtcgccaagaccgcggaccagaccgatgcccgaccg
ggtgacaaggtcacgtacacggtgaccgtccgcaacaccggcaccggtccggcgtccggc
gtgtccgtggtggacgacctgaccggcgtcctggacgacgcgacgtacaacaacgacgcc
gtcgccgtcggcccgtccacccagccggtctacgacggcacggcgcagaacctcacgtgg
acgggcgacatcgacgccggagccaccgtcaccatcacgtactcggtgaccgtgggcacc
ccgcccggcggcgacaagacgctccgcaacaccgtcacctcaccggacggcaactgctcg
gcgggctgctccaccgaggtgccgatcgcgttgctgcgcctgaagaaggccagcgccccg
gccgacccgaagcccggctcgaccatcacctacacggtgaccgcgacgaacgacggcacc
gcgccgtggaccggggcgacgttcaccgacgacctgaccggcgtgctggacgacgccgcc
tacaacaacgacgccaccgcgagttccggcgcggtcggctacgacgcggccggccggaag
ctcacctggacgggcgacgtaccagccggcagcacggtgacggtcacgtactcggtgacc
gtgggcagcccacccgccggcgacaaacgcctgaccaacgccgtcgtcggcccggacggg
acgaactgctcgcggggctccaccgaccccgactgccgcaccgacgagcccatcaccggc
ctggtgatccgcaagaccgccgcgcccgcgaccgtcaagcccggtgacaccgtcacgttc
accatcaccgccgagaacgtcggtggcgcggcggtgacgggcgcgacgctcaccgacgac
ctgaccggcgtgctggacgacgccgactaccaggccgacgccgtggcccgcgtcggcggc
acgaacgcgcccacccagccgaccttcgacgccggcacccgcaagctcacctggaccggt
gacgtcggcgtcggccagaccgtcaccatcacctacaccgccacggtcaaagcaccgccc
accggcgacttctcgctggtcaacaccgtgaccgggccggacggctcgacctgcccgccg
ggatcgaccgacccggcgtgcggcagcgtgaccccggtcggcgcggtcaccgtccgcaag
accgccgacaaggcgaccgccacacccggcgaacgcgtcacctacaccgtgacggtcgtg
aacaccggccaggcggactaccccggcgcgaccttcgccgacgacctgaccggcgtgctg
gacgacgccacgtgggacgaccaaatcaccgccgacatcggcacggccacgttcgacgcg
ggtgcgaagcgcttgacgtggaccggcgacgtcgccaagggcgcgaccgcgaccatcacc
tactcggtgacggtggggaacccgcctgctggcgacaagaggttgcgcaatgtggtgacg
gggccgaactgtccggcgggttcgactgatccggcgtgtgggacggagacgttggtcagg
tcggtgaagttggtgaagacgggcagcccggccaatccgaaggtcggtgacgtcgtcacg
tacacggttgtggtgaccaacaccggcactgctgcctacggtggggcgtcgttcgtcgat
gacctcagtgacgtgttggatgacgccacctgggacggcaacaccacggcgacggtgggt
gcggttgttttcgacgcggcgggtcagaagctgacgtggactggtgatctggcggtcggt
gcgacggcgaccgtgacctacacggtgacggtgaccaacgctggtgaccagttcctgcgg
aacgtcgtgagcggtgacggttcgaactgtccgccgggttcggacgatcctgattgccag
gtcgtgcttcccaagcctcagctgggaatcgtcaagtcggtgtcggctaccagcgtgaag
cctggcgaggtggtcacgtacacggtcaccgtcacggagaccagcgggaacgccgggtac
ccgggcgcgtccttcaccgatgatctggccggcgtcttggacgacgcttcgtggaacggt
gatgccacggcgagttcgggttccgtgacgttcgacgcgggtgcgaagaccttggcgtgg
cagggggatgtcgctgccggtgccacggtgacgatcacctacaaggtgaccgtcgggacg
ccaccgggaggtgacaagaaactgcgcaacgccgtgacggggcctgaggactcgacgtgt
ccgccgggcggggactgcggcacggacacccccgtcgccctgctggagatcaagaagacg
accgcgccgacgaccccgaaggccggtgacaccgtcacgttcaccgtcgtggtgagcaat
accggcgaggccgactacctgggcgcgtccttctccgacgacctgtccggcgtgctggac
gacgcggtttggaacggtgacgccacagcgacctccggcaccgcgacgctcgacgccgga
gcgaaaaccctggcgtggaacggagacgtggccaagggcggcacggtcaccgtcacctac
tcggtcacggtcggccgcccgccgggcggggaccgccagttgcgcaacgcggtgaccggg
ccggacggggcgacgtgcccgccgggctcgacggaccccgactgttcgaccgtgacaccg
ttggcgttgctggaactggccaagacagcgtccccggcgaccgcgaagccgggggagaag
gtcacctacacggtcaccgtccgcaaccccggtacggcgacctacgtcggcgcgaccttc
agcgacgacctgaccggcgtcctcgatgacgcgacctacaacggcgacgccaccgccggg
gcgggcagcgtcacgtacgccgcgccgaacctgacgtggcggcacgacctgcccgccggc
acgacggtcaccgtcacctactcggtcacggtcgcctcgccgcccgccggggacggcgag
ctgcgcaacgccgtgaccggaccgaccgactccacgtgccaaggcgactgcggcaccgtc
acaccggttgccgcgctgcgcatcgtcaagagcgtcgcgccgaccgatccccggcccggc
gacgaggtgacctacacggtgctggtgaccaacaccggcaaggccacgtacgccggggcg
acgttcaccgacgacctgtccggcgtgctggacgacgccaggtacaaccaggacgcccaa
gccacggtgggcgctgtcgcctatgccgcaccggttctgacgtggaacggcgatatcggg
gcgggcgccgaggtgcgcgtcacgtactccgtgaccgtgaaccggccgcccggcggtgac
aagctcctcaagaacgccgtcaccggcacgtccgatgggaactgcccgcccggcagcacg
gatccggactgcggcacggtcacgcccgtgccggcgttgaagctggtcaagaccgggacg
ccgaacgacccgaagaccggcgacacggtcacgtacacggtcaccgtcaccaacgtcggc
gaggccgcgcacccggccgcgacgttcaccgacgacttgaccggcgtggtcgacgacgcc
acgtacaacggcgacgcgtcggcgtcggcgggcgcggtctcctatgccgcaccgaaactg
acctggacgggggcgctggcgaagggcacgacggccaccgtgacctattcggtgacggtc
acgaacgtcggcgacaagcggctgagcaacgtggtcacgtccgacggctccaactgcgag
cccgggtccgacgacccggactgccgttcgaccctgcccctgccgaagctctcgatccgc
aagtcggcgacccccgacgcggtgccggcgggcgggacggtgacctaccgggtcgtcgtg
gccaacaccggcgaagcgccgtaccggggtgcgacgttcagcgacgacctgaccggcgtg
ctggacgacgcttcctacaacaacgacgcggcggccagtgcgggcgcggtcacgtacgcc
gcgccggtggtgacgtggaccggtgacgttccggcgggcgcggagatcaccgtgacgtac
acggtggtggtcgggacgccgccggccggtgacagcttcctgcgcaacgcggtcaccagc
ccggacaacacgaactgcccgctgccgatgccggcgctgttcacgcgggcggccggtccg
atcgatccggcgtgcgcgaccgagaccccgatccaggcgctgaccatgcgcaaggtcgcc
gatccggccccaaccgtggcccccggcgggacggttcgctacacggtgacggtccacaac
accggcaccgcgctgtacgagcaggcggagctgaccgacgacctggcagaggtgttggac
aacgcggcctacgacaacaacgtcaaggccgacaccgggaccgtcaccgtcaccgggacg
gtgttgcgctggcagggacggctggcaccggcccagttggcgacgatcacgtactcggtg
accgtgcacgtggacgcgaccggttcgctgcgcaacacggtggtgtccacgacaccgggc
gcgaactgcaagccggaacgcccggactgcaccaccaagaccgacgtcaccgcgacccgg
ccgccgctggcagacacgggcgcccgggtgctggaactcctcctggcggccttggcgctg
ctggcgatgggtgtactgctcgtgctccggggtcgccggacctga
DBGET
integrated database retrieval system
