Saccharothrix espanaensis: BN6_32030
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Entry
BN6_32030 CDS
T02404
Symbol
helY
Name
(GenBank) putative helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
sesp
Saccharothrix espanaensis
Brite
KEGG Orthology (KO) [BR:
sesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sesp03019
]
BN6_32030 (helY)
Enzymes [BR:
sesp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BN6_32030 (helY)
Messenger RNA biogenesis [BR:
sesp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BN6_32030 (helY)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCH30508
UniProt:
K0K1R2
LinkDB
All DBs
Position
3405450..3408206
Genome browser
AA seq
918 aa
AA seq
DB search
MSSASRSPADAYADFRRRTTRPKLTDFLSVLSFELDPFQQRACEALEDGHGVLVCAPTGA
GKTVVGEFAVHLALSEGRKCFYTTPIKALSNQKYADLVARYGEGKVGLLTGDTSVNGNAP
VVVMTTEVLRNMLYAGSSTLNSLAYVVMDEVHYLADRFRGPVWEEVILHLPESVRLVGLS
ATVSNAEEFGEWLVEVRGDTTVVVDEHRPVPLWQHMLAGGRMMDLFAGEDAEGATRLNPQ
LLRHTEDLFRYHVPWSRNKNNKGRPPRGSGFKPPSRVDIVQRLDGAGLLPAIDFVFSRAG
CDAAVGQCVRAGLRLTAEAEVEVIREIIDSKTRDLPQGDLMVLGYWEWRDALERGIASHH
AGLLPAFKETVEELFVRGLVKVVFATETLALGINMPARTVVLEKLVKYNGEAHVDLTPGE
YTQLTGRAGRRGIDVEGHAVVVWQPGIDPKAVAGLASTRTYPLRSSFRPGYNMAVNLVNQ
LGAAAAREILEQSFAQFQADRSVVGLARRLDRNREALAGYAEAMSCHLGDFTEYASLRRR
VADREKALARQNSSARRAEAASSLERLRKGDVIAVPSGRRSGLAVVIDPGLEPLGEARPL
VVTEDRWAGRLSSADFPLPVEVLGHVKLPRQVDTRSPKSRRDLASTLRNTGIVAPSLRKR
RSTADDDAELATLRRALRAHPCHGCEKREDHARWGERYHRLLAETEQLERKVAATTHSLA
REFDRIRGLLRERGYLHEQENGPGEEVTEHGKRLTRLYSESDLLAAECLRHGVWRGLDPG
ELAAVVSSLVYEARRDGPLETRLPPGKVDDAMTATARLWAELEDDERRHKLDRTRQPDPG
FAWPVYRWARGESLEKVLSSSEASGTELGAGDFVRWCRQVIDFLDQIRDVVGGGDPVGAT
ARKAVDALRRGVVAMATV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaagcgcttcgcggtctccggccgacgcctacgcggacttccgccgccgcaccacc
cggcccaagctgaccgacttcctctcggtgctctccttcgagctcgacccgttccagcag
cgcgcctgcgaggccctggaggacggccacggcgtgctggtgtgcgcgccgaccggcgcc
ggcaagaccgtcgtcggcgagttcgccgtccacctggccctgtccgagggccgcaagtgc
ttctacaccaccccgatcaaggcgctgtccaaccagaagtacgccgacctggtggcccgc
tacggcgagggcaaggtcggcctgctgaccggcgacacgtcggtcaacggcaacgcgccc
gtggtcgtgatgaccaccgaggtgctgcgcaacatgctctacgcgggctcgtccacgctg
aacagcctggcgtacgtggtgatggacgaggtgcactacctggccgaccggttccgcggc
ccggtgtgggaggaggtcatcctgcacctgccggagtcggtgcggctggtgggcctgtcc
gcgacggtcagcaacgccgaggagttcggcgagtggctggtcgaggtgcgcggtgacacc
accgtcgtggtggacgagcaccggccggtgccgctgtggcagcacatgctggccggcggc
cggatgatggacctgttcgcgggggaggacgccgagggcgccacccggctcaacccgcag
ctcctgcggcacaccgaggacctgttccgctaccacgtgccgtggagccgcaacaagaac
aacaagggccgcccgccgcgcgggtcggggttcaagccgccgtcgcgggtggacatcgtc
cagcggctcgacggcgcgggcctgctgcccgcgatcgacttcgtgttcagccgggcgggc
tgcgacgcggcggtcggccagtgcgtgcgggcggggctgcggctcaccgccgaggccgag
gtcgaggtgatccgcgagatcatcgactccaagacccgcgacctgccccagggcgacctg
atggtgctgggctactgggagtggcgcgacgcgctggagcggggcatcgcgagccaccac
gccggcctgctgccggcgttcaaggagaccgtcgaggagctgttcgtccgcggcctggtg
aaggtggtgttcgcgaccgagacgctggcgctgggcatcaacatgcccgcccgcacggtc
gtgctggagaagctggtcaagtacaacggcgaggcccacgtcgacctgacgccgggggag
tacacccagctgaccggccgggccgggcggcgcgggatcgacgtcgagggccacgcggtc
gtggtgtggcagccgggcatcgacccgaaggcggtggcggggctcgcctccacccgcacc
tacccgctgcggtcgtcgttccggccgggctacaacatggccgtcaacctggtcaaccaa
ctcggcgcggccgccgcccgggagatcctggagcagtcgttcgcgcagttccaggccgac
cgctcggtggtcggcctggcccgccggctggaccgcaaccgggaggcgctggccgggtac
gccgaggcgatgagctgccacctgggcgacttcaccgagtacgcctcgctgcgccgccgg
gtcgccgaccgggagaaggcgctggcccggcagaactcctccgcgcggcgggccgaggcg
gcgtcgtcgctggagcggctgcgcaagggcgacgtgatcgcggtgccgtccggccggcgc
tcggggctcgcggtcgtcatcgacccgggcctggagccgctgggcgaggcgcggccgctg
gtggtcaccgaggaccggtgggcgggccggctgtcgtccgcggacttcccgctgccggtc
gaggtgctggggcacgtgaagctgccccgccaggtcgacacccggtcgccgaagtcgcgg
cgcgacctggcgtcgacgttgcgcaacaccgggatcgtcgcgccgtcgctgcgcaagcgc
cggtcgaccgcagacgacgacgcggagctggccacgctgcgccgggcgctgcgggcgcac
ccgtgccacgggtgcgagaagcgcgaggaccacgcccgctggggcgagcgctaccaccgg
ctgctggccgagaccgagcagctggagcgcaaggtcgcggcgaccacgcactcgctggcc
cgcgagttcgaccggatccggggcctgctgcgcgagcgcggctacctgcacgagcaggag
aacgggccgggtgaggaggtcaccgagcacggcaagcggctgacccggctgtactccgag
tccgacctgctggccgccgagtgcctgcggcacggcgtgtggcgcggcctggacccgggc
gagctggcggccgtggtgtcgtcgctggtctacgaggcgcgccgggacggcccgctggag
accaggctgccgccgggcaaggtggacgacgcgatgaccgccaccgcgcggctgtgggcg
gagctggaggacgacgagcgccggcacaagctcgaccggacccggcagcccgaccccggc
ttcgcctggccggtctaccggtgggcgcgcggcgagtcgctggagaaggtgctcagctcg
tccgaggcgagcggcaccgaactcggcgcgggcgacttcgtgcgctggtgccggcaggtg
atcgacttcctggaccagatcagggacgtggtcggcggcggcgacccggtcggcgcgacc
gcgcgcaaggccgtcgacgcgttgcgccggggagtggtggcgatggccacggtctga
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