Saccharothrix espanaensis: BN6_64860
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Entry
BN6_64860 CDS
T02404
Symbol
sig1-1
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03090
RNA polymerase sigma-B factor
Organism
sesp
Saccharothrix espanaensis
Brite
KEGG Orthology (KO) [BR:
sesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sesp03021
]
BN6_64860 (sig1-1)
Transcription machinery [BR:
sesp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN6_64860 (sig1-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_24
HTH_Crp_2
MarR_2
HTH_23
HTH_3
HTH_AsnC-type
MarR
Sigma70_ECF
DUF7343
HNF-1_N
HTH_28
DUF1492
DUF6362
HTH_AraC
KORA
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
CCH33729
UniProt:
K0KA93
LinkDB
All DBs
Position
7223297..7224085
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AA seq
262 aa
AA seq
DB search
MTASENGGTTRSQGDYDHLAPLFVRLAATERGTAERERLRDELVTEHLPVAKHIARRFGH
RGEPYDDLVQVATVGLINAVDRFDPERGSDFLSFAVPTIMGEVRKYFRDSSWSVRMPRRL
KELHLAINAGSSRLSQQLGRAPTPSELAEHLGLSRDEIHEGLAAGNAYHSASLDDLLTAD
ESSISLGSTLGEEDPEIEAIEQREALHPLLEKLPERERKIVVMRFFGNMTQTQIAQKVGI
SQMHVSRLLAKTLRQLRDHLTE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgtccgaaaacgggggcacgacacgttcgcagggggactacgaccacctcgct
ccgctgttcgtccggctcgccgcgacggagaggggcacggcggagcgcgagcggttgcgc
gacgaactggtcaccgagcacctgccggtggccaagcacatcgcgcggcgcttcggccac
cgcggcgagccctacgacgacctggtgcaggtggccacggtcggcctgatcaacgccgtg
gaccggttcgacccggagcgcggcagcgacttcctgtccttcgcggtgccgacgatcatg
ggcgaggtgcggaagtacttccgcgactcgagctggtcggtccggatgccgcgccggctc
aaggagctgcacctggcgatcaacgccgggtcgtcgcggctgtcccagcagctggggcgc
gcgccgacgccgtcggagctggccgagcacctggggttgtcgcgcgacgagatccacgag
ggtctggcggcgggcaacgcctaccactcggcgtcgctggacgacctgctgaccgccgac
gagagctccatctcactgggcagcacgctcggcgaggaggacccggagatcgaggcgatc
gagcagcgggaggcgctgcacccgctgttggaaaagctgccggagcgggagcgcaagatc
gtcgtgatgcggttcttcggcaacatgacgcagacccagatcgcgcagaaggtcgggatc
tcgcagatgcacgtgtcacgactgctggccaagacgctgcggcaactccgcgaccacttg
accgagtga
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