Saccharothrix espanaensis: BN6_74510
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Entry
BN6_74510 CDS
T02404
Name
(GenBank) Helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sesp
Saccharothrix espanaensis
Pathway
sesp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sesp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN6_74510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sesp03400
]
BN6_74510
Enzymes [BR:
sesp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BN6_74510
DNA repair and recombination proteins [BR:
sesp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN6_74510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
nSTAND3
PIF1
PhoH
AAA_16
UvrD_C
TraI_hel_assoc_N
KOW6_SPT51-2
NPHP3_N
DUF87
AAA
SLFN-g3_helicase
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
CCH34678
UniProt:
K0KDS3
LinkDB
All DBs
Position
complement(8236182..8238353)
Genome browser
AA seq
723 aa
AA seq
DB search
MAEAVLEAVLERITFANEETGYTVARVDTGRGADLVTVVGALLGAQPGESIRMRGRWGSH
PQYGKQFHVDDYTTVLPATIQGIRRYLGSGLIKGIGPVLADRIVTHFGVDALDVIEQTPQ
RLVEVPKLGPKRTKLIAAAWEEQKAIKEVMVFLQGVGVSTSLAVRIFKQYADKSIDVVRT
EPYRLATDVWGIGFRTADTIAKAVGIPHDSPQRIKAGLQFTLSEATGGGDCFLPENQLIG
EAIKILQVDAGLVIDCLAELVAEEGVVREVMPDGEPAVYLIPFHRAEISLAGQLLRLLRT
GEERLPAFEGVDWDRAFGWLGASLEDKQRDAVRLALTRKVAVLTGGPGCGKSFTVRSIVK
LAMAKRAKVVLAAPTGRAAKRLAELTGHEARTVHRLLELRPGGDAAFDRDRPLDADLVVV
DEASMLDLLLANKLVKAVPPGAHLLLVGDVDQLPSVGAGEVLRDVLAADSPVPNVRLTHI
FRQAQQSGVVTNAHRINSGDYPLVQGLADFFLFPAEEAEDAAALTVDVVARRIPRKFGLD
PRKDIQVLAPMHRGLAGAGALNVVLQEALTPAVKDLPERRFGGRVFRVGDKVTQIRNNYD
KGVNGVFNGTLGVVTSIDVVEQKLTVKTDEDEDVDYEFGELDELTHAYAMTIHRSQGSEY
PCVVIPITTSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVGAGRRHTALDYRL
SQG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtggcggaggcggtcctggaagcggtgctggagcggatcacgttcgccaacgaggagacc
ggctacacggtcgcccgcgtcgacaccgggcggggtgcggacctggtcaccgtggtcggc
gcgctgctaggcgcgcagcccggcgagtcgatccggatgcgcggccggtgggggtcgcac
ccgcagtacggcaagcagttccacgtggacgactacacgaccgtgctgcccgcgaccatc
cagggcatccgccgctacctggggtcgggcctgatcaagggcatcggcccggtgctcgcc
gaccggatcgtcacgcacttcggcgtggacgcgctcgacgtcatcgagcagaccccgcag
cggctggtcgaggtgcccaagctcgggcccaagcggacgaagctgatcgccgccgcgtgg
gaggagcagaaggccatcaaggaggtcatggtcttcctccagggcgtcggcgtctcgacg
tcgctggcggtgcggatcttcaagcagtacgccgacaagtcgatcgacgtcgtgcgcacc
gagccgtaccggctggcgaccgacgtgtggggcatcggcttccggaccgccgacaccatc
gccaaggcggtcggcatcccgcacgacagcccgcagcggatcaaggccggcctgcagttc
accctgtccgaggcgaccggcggcggcgactgcttcctgccggagaaccagctcatcggc
gaggccatcaagatcctccaggtcgacgccgggctggtcatcgactgcctggcggagctg
gtcgcggaggagggggtggtgcgggaggtgatgcccgacggcgagcccgccgtctacctg
atcccgttccaccgcgcggagatctcactggcggggcagctcctgcggctgttgcggacc
ggcgaggagcggctgcccgcgttcgagggcgtcgactgggaccgggcgttcgggtggctg
ggcgcgtcgctggaggacaagcagcgcgacgccgtgcggttggcgctgaccaggaaggtc
gccgtgctgaccggcgggccaggctgcggcaagagcttcacggtccggtcgatcgtgaag
ctggcgatggccaagcgggccaaggtcgtgctcgccgcgccgaccggccgggcggccaag
cggttggcggagctgaccggccacgaggcgcggaccgtgcaccggctgctggagctcagg
cccggcggcgacgcggcgttcgaccgcgaccgcccgttggacgcggacctggtcgtggtg
gacgaagcgtcgatgctggacctgttgctggccaacaagttggtcaaggccgtgccgccc
ggagcgcacctgctgctggtgggtgacgtcgaccagctgccgtcggtgggggcgggggag
gtgctgcgggacgtgctggcggccgacagccccgtgccgaacgtgcggctgacgcacatc
ttccggcaggcgcagcagtccggcgtggtgaccaacgcccaccggatcaactccggcgac
tacccgctcgtgcagggcctggctgacttcttcctgttcccggcggaggaggcggaggac
gccgccgcgctgacggtcgacgtggtggcgcgacggatcccgcgcaagttcggcctggac
ccgcgcaaggacatccaggtgctcgcgccgatgcaccgggggctggccggcgcgggcgcg
ttgaacgtggtgttgcaggaggcgttgaccccggcggtgaaggacctgccggaacggcgc
ttcggcgggcgggtgttccgggtcggggacaaggtcacgcagatccggaacaactacgac
aagggtgtgaacggcgtcttcaacgggacgttgggcgtggtcacgtccatcgacgtggtg
gagcagaagttgaccgtgaagacggacgaggacgaggacgtggactatgagttcggcgaa
ctggacgaactgacccacgcttacgccatgacgattcatcgctcacagggcagtgagtac
ccgtgcgtggtcattccaatcacgaccagcgcgtggatgatgttgcagcggaacctgctg
tacacggcggtgacgcgggcgaagaagctggtcgtgctggtggggtcgcggaaggcgatc
gggcaggccgtgcgcacggtgggggcggggcggcggcacaccgcgttggactaccggctg
agtcagggctga
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