Saccharothrix espanaensis: BN6_79070
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Entry
BN6_79070 CDS
T02404
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sesp
Saccharothrix espanaensis
Pathway
sesp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sesp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN6_79070 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sesp03021
]
BN6_79070 (rpoA)
03400 DNA repair and recombination proteins [BR:
sesp03400
]
BN6_79070 (rpoA)
Enzymes [BR:
sesp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN6_79070 (rpoA)
Transcription machinery [BR:
sesp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN6_79070 (rpoA)
DNA repair and recombination proteins [BR:
sesp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN6_79070 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CCH35125
UniProt:
K0K4G0
LinkDB
All DBs
Position
complement(8737591..8738643)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPSLSEEAVNETRSRFVIEPLEPGFGYTLGNSIRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDLHIATLNGKGKLEIELVVERGRGYVPAVQNKQAGAEIGRIPVDSIYSPVMKVTYKVEA
TRVEQRTDFDKLILDVETKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPAE
ADTIAAFAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKMK
LVGLGLALKDSPPGFDPSAAASDYPAEGWGADTTVDSHDDGQDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatttcccagcgcccctcgctcagcgaggaagcggtcaacgagacccgctcccgg
ttcgtcatcgagccgctggagccgggcttcggctacaccctcggcaactccatccgccgc
accctgctgtcgtccatccccggcgcggccgtgaccagcatccgcatcgacggtgtgctg
cacgagttcacgaccgtccccggtgtgaaggaagacgtcaccgacatcatcctcaacctc
aaggagctggtcgtcagctccgaggaggacgagccggtgaccatgtacctgcgcaagcag
gggcccggtgcggtgaccgcaggcgacatcgtgcccccggccggtgtcaccgtgcacaac
cccgacctgcacatcgcgaccctgaacggcaagggcaagctggagatcgagctcgtggtc
gagcgcggtcgcggctacgtccccgccgtgcagaacaagcaggccggtgccgagatcggc
cgcatccccgtcgactcgatctactcgcccgtcatgaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcggaccgacttcgacaagctgatcctcgacgtcgagaccaagccc
tccatcacgccgcgcgacgccgtcgcgtccgcgggcaagaccctggtggagctgttcggt
ctggcgcgcgagctcaacgtcgacgccgagggcatcgagatcggaccgtcgcccgccgag
gccgacaccatcgcggcgttcgcgatgccgatcgaggacctggacctcaccgtccggtcc
tacaactgcctcaagcgcgagggcatccacacggtgggcgagctggtctcgcgcagcgag
gcggacctgctggacatccgcaacttcggtgcgaagtcgatcgacgaggtcaagatgaag
ctcgtcggtctcggcctcgcgctgaaggactccccccctgggttcgacccctcggccgcc
gcgtccgactaccccgccgagggctggggcgcggacacgaccgtggacagccacgacgac
ggccaggactacgcggagaccgagcagctctga
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