Salmonella enterica subsp. enterica serovar Enteritidis P125109: SEN1329
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Entry
SEN1329 CDS
T00776
Symbol
yciR
Name
(GenBank) conserved hypothetical protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
set
Salmonella enterica subsp. enterica serovar Enteritidis P125109
Pathway
set02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
set00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SEN1329 (yciR)
Enzymes [BR:
set01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SEN1329 (yciR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
CAR32907
UniProt:
A0A6C7HQL4
LinkDB
All DBs
Position
complement(1418157..1420139)
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AA seq
660 aa
AA seq
DB search
MMKQIQEQTALNPLHSHWRLADDRNVLYLSPTGETDTEKTVELSPEQAGRIREITAITSS
LLITLLIEKQVTAVHLVGRKINNREWAGSLATWPDTPAVAPTQAQELSFAEQIVSEANSV
IAILDSRGKICRFNRLCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNGNAY
EIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRAQERLRILANTDTVT
GLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLALLSC
LEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGISLA
PRHGQDSDSLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALENDQLL
IHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVVRQI
ARWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIENDTLA
LSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSQSLVRAI
VAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRYQTKKMR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacagattcaggaacaaacggcgctaaatccccttcactctcactggcgtctg
gctgatgaccgcaacgtgctgtatctctccccgacaggtgaaacggatacagaaaaaacg
gtcgagctatcgccggagcaagccgggcgtatccgggaaataacggcgattacgtccagt
ctgctgataacgttgttgatagaaaaacaggttaccgctgtgcacctggtaggccgtaag
attaataaccgtgaatgggctggcagcctggcaacctggcctgatacgcctgccgtcgcg
ccaacgcaggcgcaggagctctcttttgccgagcaaatcgtatcagaagccaactcagtc
attgcgatactggatagtcggggaaaaatctgtcgatttaatcggttatgcgaagagtac
acgggcttaaaagagcgagatgtaattggtcaaagcgtctttaaattatttatgagtcgc
cgggaggcggttgcctcccggcactacattgagaatttttttcgcaatggcaatgcctat
gaaatcgaacgctggataaagacccgtaaaggccaacgcctgttcttatttcgtaataaa
tttgtccataacggtagcggaaaaaacgaaattttcctgatctgcgcaggcacggatatc
accgaagaaaggcgggctcaggagcgtttacgcatactggcgaatacagacaccgtcacc
ggcctgcccaatcgcaatgcgatccatgaatttattaatcatgctattgcctcggctggc
gagtcgcaagtgggtatcgtttatctcgatctggataacttcaagaaaattaatgacgcc
tatgggcatatgtttggcgatcagctcttacaggccgtttcgctggcgctgttgagttgt
ctggaggaagatcaattgctggccagactggggggagatgaattcattgtcctcgctgcc
catacgtctcaggccgcgctggaagcagtagcctcacgaatccttacccgtctgcggcaa
ccgtttcgtattggactcattgaagtttacacgggatgcgccattggcatttcgttggcc
ccccggcacggacaggacagcgacagtctcattcgcactgccgacaccgcaatgtataac
gccaaagaaggcggccgcggtcagttctgcgttttttcgccggaaatgaatcagcgcgta
tttgactatcactggctggatacaaacctgcgaaaagcgctggaaaacgaccagttactt
attcactatcagcccaaaattacctggcgcggcgaagtacgtagcctggaagcgctggta
cgctggcaatcgccggaacgcggattaattccgccgctggagttcatctcatacgccgaa
gagtcaggactcatcgtcccgctgggccgctgggtgattctggatgtggttcgccagatt
gcgagatggcgcgataaggggattaacttgcgcgtagccgttaacttttcggcgcgacaa
ctggccgaccagacgctttttactgcgcttaaacaggctttgtacgatctgaattttgag
tattgcccgatcgatgtcgagctaacggaaagctgcctgatcgaaaacgacacgctggcg
ctatcggttatccagcaatttagtcagctcggcgcccagattcatctggatgattttggc
accgggtattcttcgctttctcaactcgcccggttccctattgatgccgttaaactggat
caggctttcgtcagagatatccataagcaaccgctgtcgcaatctctggttcgggcgatt
gtcgcggtggctcaggcgctaaatttacaagtgattgccgaaggcgtagaaaatgctaaa
gaagatgccttcctgacaaaaaacggcgtcaatgaacgacagggctttttattcgccaaa
cctatgcccgccgtttcttttgaacgctggtacaaacgttatcagacgaaaaaaatgcgt
taa
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