Salmonella enterica subsp. enterica serovar Enteritidis P125109: SEN2066
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Entry
SEN2066 CDS
T00776
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
set
Salmonella enterica subsp. enterica serovar Enteritidis P125109
Pathway
set03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
set00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SEN2066 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
set03400
]
SEN2066 (sbcB)
Enzymes [BR:
set01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
SEN2066 (sbcB)
DNA repair and recombination proteins [BR:
set03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SEN2066 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SEN2066 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SEN2066 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAR33645
UniProt:
A0A6C7HRQ2
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All DBs
Position
2147693..2149123
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AA seq
476 aa
AA seq
DB search
MTVKNDSIQSTFLFHDYETFGTHPALDRPAQFAALRTDNDFNVIGEPEVFYCKPADDYLP
QPGAVLITGITPQEAREKGENEAAFARRIHALFTVPKTCVVGYNNVRFDDEVTRNIFYRN
FYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANGIEHSN
AHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAW
RGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHAAVPVK
LVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRENPQVRDKVVAIFAEAEPFAA
SDNVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTL
DDAEQQRWLEHRRQVLTPEFLQQYANELQMLSQQYAEDKTKLGLLKSLWQYATEIV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgacagttaaaaacgacagcatacagagcacattcctcttccacgattacgaaaccttc
ggtacgcatccggccctcgacagacctgcgcaattcgccgcgctccgtacggataacgac
ttcaacgttatcggcgagccggaggtgttttattgcaaacccgccgatgattatctaccg
cagcccggcgcggtgctgattaccggcatcacgccgcaggaagcgcgtgagaaaggagaa
aacgaagccgctttcgccagacgcattcatgcgctgtttaccgttcctaaaacctgcgtt
gtgggctacaacaatgtgcgttttgatgatgaagtcacgcgcaatattttttatcgcaac
ttttacgatccctatgcctggagctggcagcatgataattcacgttgggatctattggat
gtcatgcgcgcctgttatgcgctgcgcccggagggaattaactggccggaaaacgacgac
ggcctgcccagctttcgtctggaacatttaacccaggcgaacgggatcgaacacagcaac
gcgcatgatgcgatggcggatgtctacgccactattgcgatggcgcaactggtgaaaaca
cgccagccgcggctgtttgattatctttatagccaccgcagtaaacataaactggcggcg
ctgattgacgtcccgcaaatgaagccgctggtgcatgtctccggcatgtttggcgcgtgg
cgcggtaatacaagctgggtcgcgccgctggcgtggcatcctgaaaaccgtaacgcggtg
atcatggtcgatttagcaggcgatatttctcctcttcttgagctggacagcgacaccctt
cgcgagcggctttatacggccaaagccgatcttggcgatcacgccgcagtgccggtaaag
ctggtgcatatcaataaatgtccggtactggcgcaggcgaataccttgcgcccggaggat
gccgaccggctgggaattaaccgccagcattgcctggataacctgaaagtgttgcgtgaa
aacccgcaggttcgcgacaaagtggtggcgattttcgccgaagccgaaccttttgccgcc
tcggataacgttgatgcccagctctatgatggttttttcagcgatgccgatcgcgcagcc
atgaaaatcgtactcgaaaccgagccacgtaacctgcccgcgctggacattacctttgtc
gataagcgcattgagaagctgctgtttaattaccgcgcacgcaattttcccggtacgctg
gatgacgcagagcagcagcgctggctagagcatcgccgtcaggtgctgacgccggagttt
ttacaacaatatgccaatgaattgcagatgctttctcagcagtatgcggaagataaaacg
aagctggggttgctgaaatcactgtggcagtacgcaactgagattgtgtaa
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integrated database retrieval system
