Salmonella enterica subsp. enterica serovar Enteritidis P125109: SEN2093
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Entry
SEN2093 CDS
T00776
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
set
Salmonella enterica subsp. enterica serovar Enteritidis P125109
Pathway
set00521
Streptomycin biosynthesis
set00523
Polyketide sugar unit biosynthesis
set00525
Acarbose and validamycin biosynthesis
set00541
Biosynthesis of various nucleotide sugars
set01100
Metabolic pathways
set01110
Biosynthesis of secondary metabolites
set01250
Biosynthesis of nucleotide sugars
Module
set_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
set00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SEN2093 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SEN2093 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SEN2093 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SEN2093 (rfbB)
00525 Acarbose and validamycin biosynthesis
SEN2093 (rfbB)
Enzymes [BR:
set01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SEN2093 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Gp_dh_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
CAR33676
UniProt:
A0A6C7HQN0
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All DBs
Position
complement(2182131..2183216)
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AA seq
361 aa
AA seq
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MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC
DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE
DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA
WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA
RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH
DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGR
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatacttattactggcggggcaggttttattggatcagctgttgtccgccatatt
attaagaatacacaggacactgtagttaatattgataaattaacctacgccggtaatctt
gaatccctttctgatatttctgagagtaatcgctacaattttgaacacgcggatatttgt
gattccgctgaaataacgcgtatttttgagcagtaccagccggacgcggtgatgcatttg
gctgcggaaagtcatgtggaccgttcgattaccgggccagcagcatttattgaaaccaat
atcgtcggcacctatgtacttcttgaagttgcgcgtaaatactggtctgcgcttggcgaa
gataaaaaaaataattttcgttttcatcatatttccactgatgaagtttacggcgattta
ccgcatcctgatgaagttgaaaacagcgttacgctgccgttatttactgaaacgacggca
tatgcgccaagtagcccctattctgcgtcaaaagcatccagcgatcatttagtccgtgcc
tggcggcgtacctatggtctaccaacgatcgttaccaattgttctaataactatggccct
tatcacttccctgaaaaactgattccgttggtcattttgaacgcactggaaggaaagcct
ttgccaatttatggcaaaggggatcagattcgcgattggctatatgtagaagatcatgct
cgcgcgcttcatatggtagtgactgaaggcaaggcgggggagacttataacattggtggc
cacaatgagaagaaaaatctcgatgtggtatttaccatctgtgatctgctggacgagatt
gtacccaaagcgacttcttatcgtgaacaaatcacttatgtcgcggatcgtccgggccat
gatcgtcgttatgccattgatgcaggtaaaattagccgcgaattaggctggaaaccgctg
gagacctttgaaagcggtattcgtaaaacagtggaatggtaccttgcaaatactcaatgg
gtaaacaatgttaaaagtggggcgtatcagagttggatagaacagaactatgaaggacgc
cagtaa
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