Salmonella enterica subsp. enterica serovar Enteritidis P125109: SEN2493
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Entry
SEN2493 CDS
T00776
Symbol
shdA
Name
(GenBank) host colonisation factor (ShdA)
Organism
set
Salmonella enterica subsp. enterica serovar Enteritidis P125109
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
AC_1
ESPR
Motif
Other DBs
NCBI-ProteinID:
CAR34076
UniProt:
A0A6C7HSK9
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All DBs
Position
complement(2628623..2634688)
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AA seq
2021 aa
AA seq
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MRNMYVVASELARGHSKVKAQVCASEIHSPNQKSEYGQIIKATRAALACAVAAALGFFSP
LAMADNQVSYADAQTHVLDASTPPMSYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIET
SGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGSTLTLTDSTLTI
DGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNT
ATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDIT
GGNITSAGTGVYILASDARIDGATINADGDGIFITSKRKLDGYEDLNALTVNKAQVNSDT
IALHVDTGTTINAPIVLTDSTFEAPEVIKLGSKAVIQANNTTLIGDVAQSDMSSSSLSLS
QGATLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTL
TLQDNSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQSA
ITTDFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVD
AGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAAKDAAAL
GTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNTYSGGTTISGGTLTAD
HADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTL
TADHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIG
GTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTT
IIGGTLTADHADLLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSG
GTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNS
YSGDTTIADGTLIAANVNALGSGNIDNSGTLMLDANGAFELANITTHTGATTALAAGSTL
DAGQLTQEDGSTLSIDLGAATDDAVITADSVTLGGTLNVTGIGSVTDSWTPEAYTYTLID
SDSAITSDFDDLTIAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHG
TFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEG
TLVAASTTALGTGLVDNNATLVLDVDGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQ
QDGSTLNVELNSDSVQPLITGGSATLGGDLVVSDASLQARASDAEFQSFKLMDMDSDISG
DFTSLTMNLTDQPDYLTVTGTINPADASEYLLTEGLSWNATATSATPAHGTFTLGAGDSF
EVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYTGDTNVQEGTLWLSGDGSIGEMGS
QQAVNVASGATFGGSNGTTVNGKVTNEGTLVFGDSEETGAIFTLNGDLINMGTIASGSTS
STPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGIGDGAQTT
NGIEVVDVGGVSTSDAFELKNEVNASLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDSD
VTPSDGGDDGGNVTPPDDGGDGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYR
NADGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINA
DTDSTGNRGADGSQFTSSGNVDGYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESG
DAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVWQNYSADSVKDNYGTRIDG
QDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAE
LKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaaatatgtatgtcgtggcttcagaactggcgcgaggccacagcaaagttaaagcg
caagtatgcgcgagtgaaatccattctccaaaccaaaagtccgaatatggacaaataata
aaagcaacgcgcgcggcgctggcttgcgccgtggctgcagcgctcggatttttcagcccg
ctggccatggccgacaatcaggtatcatatgctgatgcgcagacccacgttctggatgcg
tcaacgccgccgatgagctattcgggcaccgatgaaggcgcggcgctatatgtctcgggt
gtcgccaccgtcggctggcagcccaccacggtcacagggacggggctcgtcattgaaaca
agcggaggcggagctgatgatccggatggcggtaagtatgtttccaacgcaatttcgctg
gatcattacgctatccttgagcttaccgacgcgaagataaccactacgggcatttatacc
cagggtatttccgcagcggatggcagcacactgacgttaacagacagtacgctaacgatt
gacggcaatttcggcgtaatgacgttgtatacgggttcagaagcaacgctggacggtacc
atcgttgaggcagctaacagcagcagcgcgcaggtgcaacaaggcagtacgctgaacgtg
ctggacggtagcacaatcaccctggcgcaaggccagataaacgttgttgccggaaacacc
gcgacagacgagggttccaccctgaacctgtctgatagctcggtcagctctgcaggtacg
atgagcaccatccagggtaccaataaggccgctcttaatctcaccaacgcgaccataaca
cataccaatgccagcggcgcggcggtacaggccaataacgccactaccctggatattaca
ggcggcaacattacctctgccggtacgggcgtgtatattctggcgtcggacgccaggatc
gacggcgccaccatcaacgccgacggcgacggtatctttataaccagcaaaagaaaactc
gacgggtatgaagatctcaacgcgctgacggtcaacaaagcacaggttaattcagacacg
attgcgctgcatgtggacactggcacgacgattaacgctcctatcgtgctgaccgacagc
acatttgaagcgccggaagtgatcaagcttggcagcaaggcggtcattcaggccaacaat
acgacattgatcggtgacgttgctcagagtgacatgtcatcgtcatcgctctctttaagc
cagggggccacgttaaccggtagtgtagatgcgatgtttactacgctgtcgctcgacgac
accagccagtggaacatgaccgacccgtcaaccgtcggcaatctgaccaacgacggcgat
attacgctgggcaacgcgagcggttcgacaggtacgctgctgacggtggacaataccctg
accttacaggataacagccagataaacgcgacgctggataccgccaacagcgcgccaatt
atcaaagccgccaacgtcacgctggacgggacgctgaaccttagctcaacggccaccttt
gtcgcgcccgaaaccgacgaacactttggatcgatcacgctgattgattcacaaagcgca
atcactaccgattttgacagcgtaacactggatgctgacacctccgctatgccggattat
ctgacgatcaacgcgggcgttgatgcgaatgataataccaactacgagttgtctacgggc
ttgagttggtacgcgggcgcaaattctgcgcgcgctgcgcatggcacttttaccgttgat
gcaggcagtacctttaccgtcaccagcgaactggacgaaaccacggcgacctccaactgg
aacggcagcaagctaaccaaacaaggcgacggcacgctgatcctcagcaacaccggcaac
gactacggcgatactgaaattgacggcggcattctggccgccaaagacgccgccgcgctc
ggcactggcgatgtgacgattgcagaaagcgcaacgcttgcgctgagccagggcacgctg
gataacaacgtgaccggcgagggccaaattgtcaaaagcggtagcgatgagctgatcgtg
accggcgataacacttacagcggcggcaccactatttccggcggtacgctgacggctgac
catgcggattcgctgggtaccggggctgttgctaacagcggcgtgcttcaggtcggcgaa
ggcgagctggaaaatacgctttccggcagcggctcgctggtgaaaaccggcacaggcgag
ctgacgctaagcggcgacaacacttactccggcggcaccaccattaccggcggtacgctg
acggctgaccatgcggattcgctgggcagcggcgatatcgataacagcggcgtgcttaag
gtgggcgaaggcgatctggaaaatacgctttccggcagcggttcgctggtgaaaaccggt
accggcgagctgacgttaagcggcggcaacgattactccggcggcaccaccattatcggc
ggtacgctgacggctgaccatgcggattcgctgggtaccggagctgttgccaacagcggc
gtgcttcaggtcggcgagggcgagctggaaaatacgctttccggcagcggttcgctggtc
aaaaccggtacgggcgaactgacgttaagcggcgataacagttactccggcggcaccacc
attatcggcggtacgctgacggctgaccatgcggatttgctgggtaccggagctgttgcc
aacagcggtgtgcttcaggtcggcgagggcgagctggaaaatacgctttccggcagcggt
tcgctggtcaaaaccggtacgggcgaactgacgttaagcggcgataacagttactccggc
ggcaccaccattatcggcggtacgctgacggctgaccatgcggattcgctgggtaccgga
gctgttgccaacagcggtgtgcttcaggtcggcgagggcgagctggaaaatacgctttcc
ggcagcggttcgctggtgaaaaccggtacgggcgagctgacgttaagcggcgataacagt
tactccggcgataccaccatcgccgacggcacgctgattgccgccaacgtcaacgcgctg
ggcagcggcaatatcgacaacagcggtacgctgatgctggatgccaacggcgcatttgag
cttgcgaacatcaccacccataccggcgccacgaccgcgctggcggcgggcagcaccctt
gacgcgggccagctcacccaggaagacggcagtacgctaagtattgacctcggcgcggcc
accgacgacgccgtgattaccgccgacagcgtcacgctgggcggcactctgaatgttacc
ggcatcggcagcgttacagacagctggacgcctgaggcatacacctatacgctgattgac
agcgacagcgccattacgagcgatttcgacgatctgaccattgcagggatgaaccgcgaa
gatgttgacttcctgactatcgacggaaaagtcgatgaagcagacaacacccactatgat
ctgacggcctccctctcctggtatgcggacagagacaacgccactaccgacgcccacggc
acctttaccctgagcgaccctgacggcagctttaacgttgcggctacactgacagacgtt
gatgacacgctggatccgggtagcagatgggacggtaaatcgctgaccaaagaaggcgca
ggcactctgatcctctccggcgacaacgactacagcggcggcaccaccatcaatgaaggt
acgctggtcgccgccagtacgacggcgctgggcaccggtctggtagacaataacgccacg
ctggtgctggacgtagacggtgaagtcagcgcggtgggcggcatcaccactcatagcggc
gcgacgacccaactggcgctcggcacctcgttggatctcggcgacagcgcgttaattcag
caagatggcagtacgctgaacgttgagctgaatagtgactcagtgcaaccgctgatcacc
ggcggcagcgccacgcttggcggcgatttggtcgtcagcgacgccagcctgcaagcgcgc
gcctccgacgcggagttccagtcctttaaactgatggatatggacagcgatatcagcggc
gactttaccagcctgacgatgaacctcaccgaccagccggactatctgaccgtaaccggg
acaatcaatcctgcagatgcgtcagaatatttgcttaccgaagggctgagctggaatgcg
accgccacgtcagcgacgccagcacacggcacgtttaccctgggcgcaggcgacagtttt
gaagtcaccagcgtactgggcgataaaaccggcaacggcgactgggacggtaaatcgctg
accaaactgggcgcgggtaaactgacgctgagcggcgcgaacacctacaccggcgatact
aacgtacaggaaggcacgctatggctgtccggagacggctcgattggcgagatgggcagc
cagcaggcggtgaacgtcgcctccggggcgaccttcggcggcagcaatggtacgaccgtt
aacggtaaggtgaccaacgaagggacgctggtcttcggcgacagcgaggagacaggcgct
atcttcaccctcaatggcgatctgatcaacatggggacgatcgccagcggcagcacctcc
agcacgccgggcaatacgctttatgttgatggcaattacaccggcaacggcggctcgctt
tatctgaataccgtcctgggcgacgatgattcggcgaccgataagctggtgattaccggc
gatgcctccggcaccaccgatctgtacatcaacggcatcggcgatggagcacagaccact
aacggtattgaagtggtggatgttggcggcgtatcgaccagcgatgcgtttgagctaaaa
aatgaggttaacgccagtctgtatacctaccgtctgtactggaatgaaagtgacaacgac
tggtatctggcgtcaaaagcacagtctgatgatgacgacagcggtggtgatgacagtgat
gtcacgccttcggatggcggtgacgatggcggtaatgtcacgcctccggacgacggcggc
gatggcggcgatgtcgcaccacagtaccgtgcggatatcggcgcgtacatgggcaaccag
tggatggcgcgcaacctgcaaatgcagaccctctatgaccgcgagggcagccagtatcgt
aatgccgatggcagcgtatgggcgcgcttcaaagcgggtaaagcagaatcagaggctgtc
agcggcaatatcgatatggacagcaactactcccagttccagttaggcggcgacattctg
gcctggggcaacggccagcagagcgttaccgttggcgtcatggcgagctacatcaacgcc
gataccgacagcaccggtaaccgtggcgcggacggtagccagttcaccagtagcggcaac
gtagacggctataaccttggcgtctatgccacctggtttgccgatgcccaaacgcatagc
ggcgcgtatgtcgacagctggtaccaatatggtttctacaacaacagcgtagagagcggt
gatgcgggatctgaatcttatgattcaaccgctaacgccgtctcgctggaaactggttat
cgctacgatattgcgcttagcaacggtaatactgtcagtctgacgccgcaggcgcaggtt
gtctggcagaattactcagcggatagcgtgaaggataactacggcacccggatcgatggt
caggatggcgacagttggacaacgcgtctgggtctgcgtgttgacggcaagctgtacaaa
ggcagccgtacggttatccagccgtttgctgaagctaactggctgcacaccagcgatgat
gtgtcggtatcgtttgatgatgctacggtgaaacaggatcttccggctaaccgtgcggag
ctgaaagtgggtctgcaggcagatatcgataagcagtggagcgttcgcgctcaggttgcc
gggcagactggcagcaatgactttggcgatctgaacggtagcctcaatctgcgctataac
tggtaa
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