Salmonella enterica subsp. enterica serovar Enteritidis P125109: SEN3347
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Entry
SEN3347 CDS
T00776
Symbol
rtcR
Name
(GenBank) transcriptional regulatory protein.
KO
K14414
transcriptional regulatory protein RtcR
Organism
set
Salmonella enterica subsp. enterica serovar Enteritidis P125109
Brite
KEGG Orthology (KO) [BR:
set00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
set03000
]
SEN3347 (rtcR)
Transcription factors [BR:
set03000
]
Prokaryotic type
Other transcription factors
Others
SEN3347 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
NACHT
AAA_22
AAA_30
AAA_7
MCM
AAA_14
AAA_19
AAA_33
ATPase_2
T2SSE
AAA_18
TsaE
AAA_2
Motif
Other DBs
NCBI-ProteinID:
CAR34922
UniProt:
A0A6C7HUJ5
LinkDB
All DBs
Position
3565438..3567021
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AA seq
527 aa
AA seq
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MRKTVAFGFVGTVLDYAGRGSQRWEKWRPTLCLCQQETLVVHRLELLYDARSRSLFEGLK
KDIASVSPETEVVGVEIAIRNPWDFEEVYACLHDFARSHTFHPEDEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLAQTSPPRKKDKPHSTGDVTIIDLDLSRYNDIATRFAQEREETLN
FLKSGIATRNPCFNRMIEQIERVAIRSRSPILLNGPTGAGKSFLARRIYELKLARHQFSG
PFVEVNCATLRGDTAMSALFGHVKGAFTGAREERAGLLRSADGGMLFLDEVGELGADEQA
MLLKAIEEKRFYPFGSDQQVSSDFQLIAGTVRDLRQRVAEGTFREDLYARINLWTFELPG
LRQRQEDIEPNLDYELERHAALTGDSVRFNTEARRAWLSFATSPQAAWRGNFRELSASVT
RMATLADNGRITVETVDDEIARLRYSWNDHRPSALDGLPGIDATALDLFDRMQLENVVAI
CRQAKTLSDAGRQLFNVSRQGKATVNDADRLRKYLARFGLTWDVLQN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaacggtggcctttggttttgtcggcacggtgctcgactatgcaggacgcggc
agtcagcgttgggaaaaatggcgccctactttgtgtctgtgtcagcaggagacgctggtc
gttcaccgcctggaactgctgtacgatgcccgctctcgctcgctgtttgaaggattaaag
aaggatatcgccagcgtctcgccggaaacggaagtcgtcggcgtagaaatcgcgatccgc
aacccgtgggacttcgaagaggtttacgcctgcctgcacgatttcgcccgcagccatacc
tttcatcccgaagatgaagactatctgattcatatcaccaccggcacccacgtcgcgcag
atctgctggttcctgctggcggaggcgcgctatctaccggcgcgattagcgcagacctcg
ccgccgcgcaaaaaagataaaccgcatagcacgggcgacgtgacgattattgacctcgac
ctcagccgctacaatgacatcgccacccgcttcgcccaggagcgggaggagacgctcaac
ttcctgaagtccggcattgcaacccgcaacccgtgtttcaaccggatgattgagcaaatt
gagcgcgtcgcgatacgctcccgttcgccaatcctgctcaacggcccgaccggcgcgggc
aagtcgtttctcgcccgtcgcatctatgaactaaaactggcccgccaccagttcagcggc
ccgtttgtcgaagtgaactgcgccaccctgcgcggcgacacggcgatgtcggcgctgttc
ggccacgttaagggggcgtttaccggtgcgagagaggagcgtgcaggactgctgcgcagc
gccgacggcggcatgctgtttcttgacgaagtgggagaactgggcgcggatgaacaggcc
atgttgctgaaagccattgaagagaaacgcttttaccctttcggcagcgaccagcaggtc
agcagcgatttccagttgattgccggcacggtgcgcgacctgcgccagcgagtggcggag
gggacattccgcgaagacctgtacgcgcgcattaatctctggaccttcgaactaccgggc
ctgcgtcagcgccaggaagatattgaaccaaaccttgactacgaactggaacgccacgcg
gcgctaaccggcgacagcgtgcgttttaataccgaagcgcgccgcgcctggctgagcttc
gccacctcgccgcaggccgcctggcgcggtaacttccgcgaactctccgccagcgtcacc
cgcatggcgacgctagcggacaacgggcgaatcacggtcgaaacggtagacgatgaaatc
gcgcgtttgcgctatagctggaatgaccatcgcccctccgcgctcgacggattgccgggc
attgacgcaacggcgctggatctgtttgaccgtatgcaactggaaaacgtcgttgccatc
tgccgccaggcgaaaaccctttccgacgccgggcggcagctattcaacgtttcccgtcag
gggaaagccacggtgaatgacgctgaccggctgcgtaagtacctggcgcgttttgggctg
acgtgggacgttttacagaattaa
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