Salmonella enterica subsp. enterica serovar Enteritidis P125109: SEN3541
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Entry
SEN3541 CDS
T00776
Symbol
rfaB
Name
(GenBank) lipopolysaccharide 1,6-galactosyltransferase
KO
K02840
UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
Organism
set
Salmonella enterica subsp. enterica serovar Enteritidis P125109
Pathway
set00540
Lipopolysaccharide biosynthesis
set01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
set00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SEN3541 (rfaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
set01005
]
SEN3541 (rfaB)
Lipopolysaccharide biosynthesis proteins [BR:
set01005
]
Core region
SEN3541 (rfaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
MGDG_synth
DUF4751
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
CAR35120
UniProt:
A0A6C7HV06
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Position
complement(3795638..3796717)
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AA seq
359 aa
AA seq
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MKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKEIKYAQS
FSNIKLSFLRRAKHVYNFSQWLKETSPDIVICIDIISCLYANKARKKSGKQFTIFSWPHF
SLDHKKHAECITYADYHLAISSGIKEQMMARGISAQNISVVYNPVSIKTIIVPPPERDKP
AVFLYVGRLKFEGQKRVKDLFDGLTRTTGEWQLHIIGDGSDFEKCQAYSRELGIEQRVIW
YGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDMIKPG
LNGELYTPGAIDDFVGHLNRVISGEVKYQHDIIPGTIERFYDVLYFKNFNNAIFSKLQK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcatttattggcgaagcggtatctggttttggagggatggaaaccgttatt
agcaacgttatccatacgtttgaaaatagctctccgaaaatcaactgtgaaatgtttttc
ttttgtcgtaatgacaaaatggataaagcatggctaaaagagattaaatatgcgcaatca
ttctcaaatataaaattaagttttcttcgtcgagctaagcatgtttataattttagtcag
tggctgaaagaaacgtcaccggatattgtgatatgtattgatatcatctcatgtctttat
gccaataaagcacgaaagaaaagtggtaaacagttcactattttctcgtggccgcatttt
tcgctcgaccataaaaaacatgcagaatgtataacgtacgcggattatcatctggccata
agtagtggtattaaagaacagatgatggcacggggtatctcagcgcaaaatattagcgtc
gtttataatcctgtctctattaaaacaatcattgtgccgccgcctgagcgcgataaaccc
gctgtatttctctatgtagggcgtcttaaatttgaaggacagaaaagagttaaagattta
tttgatggcttaactcgtacgacaggggaatggcagctacatattattggtgatggctca
gattttgaaaagtgccaggcctatagtcgggagcttggtattgagcagcgtgtgatctgg
tatggttggcaaagcgcgccgtggcaagtcgtacagcaaaaaataaaaaatgtcaccgcg
ttactacttacctctgcgtttgagggatttcctatgaccctgctggaagcaatgtcatat
ggaattccgtgtattagttctgattgtatgtctggcccgcgcgatatgattaaacccggt
ttgaatggtgagctttacactccgggtgctatagatgattttgtaggacaccttaatcgc
gttatttctggtgaagtaaaatatcagcatgatattattcccggcacgattgagagattt
tacgatgtgctatattttaaaaattttaataatgcaatattctcgaaattacaaaagtga
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