Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_00590
Help
Entry
CFSAN001921_00590 CDS
T02737
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setc03016
]
CFSAN001921_00590 (truB)
Enzymes [BR:
setc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CFSAN001921_00590 (truB)
Transfer RNA biogenesis [BR:
setc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFSAN001921_00590 (truB)
Prokaryotic type
CFSAN001921_00590 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGQ66544
LinkDB
All DBs
Position
114455..115399
Genome browser
AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggccgcgacattcacggcgttctgctgctggataagccg
cagggtatgtccagcaatgacgtgctgcagaaagttaagcgcatctacaatgccaaccgc
gccgggcataccggcgcgctggacccgctggcgaccggcatgttgccgatttgcctcggc
gaagcgacaaaattttcgcagtacctgctggattctgacaaacgctatcgtgttattgcc
cgtctggggcagcgcacggatacctctgacgccgatggtcaaatcgtgcaggagcgtccg
gtgactttcagcgctgagcagcttgcgagcgcgctggagactttccgcggcgatattgag
cagattccgtcaatgtattcggcgctgaagtatcagggtaagaaactgtacgaatatgcc
cgccagggtatcgaagtgccgcgcgaagcccgcccgattaccgtctatgagctgctgttt
attcgccatgaaggtaacgagctggagctggaagttcattgctccaaaggcacctatatt
cgtaccattattgatgatttaggtgagaaactgggctgtggcgcgcacgtaacgtacctg
cgtcgtctgacggtcagcaagtatccggtggatcgtatggtgacgctggagcatttgcag
acgctggtagcacaggcggaacagcagggcgttccggcggcgcagttgctcgatccatta
ttgatgccaatggacagtccagcttcggactatcctgttgttaatctgccgttaacatct
tcggtatacttcaaaaatggcaacccggttcgtaccacgggcgcgccgttgaagggactg
gttcgtgtgacggaaggtgaagacgataaatttatcggtatgggcgaaattgacgacgaa
ggccgtgtcgcgcctcgtcggctggtagtagagtacccagcgtaa
DBGET
integrated database retrieval system
