Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_00700
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Entry
CFSAN001921_00700 CDS
T02737
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setc03000
]
CFSAN001921_00700
Transcription factors [BR:
setc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CFSAN001921_00700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
HTH_PafC
HTH_5
CoA_trans
IF-2B
CggR_N
Asp_protease_2
FeoC
AIRS
MarR_2
HTH_12
DsrD
PaaX
FaeA
MarR
Fe_dep_repress
TrmB
Motif
Other DBs
NCBI-ProteinID:
AGQ66561
LinkDB
All DBs
Position
complement(135201..135974)
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AA seq
257 aa
AA seq
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MNSFERRNKIVDLINTQGSVLVMDLSNTFGISEVTIRADLRLLEEKGLVTRFHGGAAKPG
SHLAEGDNQEVILEDRYQLASDPKKRIAQAAAAMVEEGMTIILDSGSTTLLIAEALARKS
NITVITNSLPAAFTLSENKDLTLVVCGGTVRHKTHSMHGTIAERSLHGISADLMFVGADG
IDATNGITTFNEGYSISGVMAAAAHKVIAVLDATKFNRRGFNQVLPMDKIDCVITDDTIS
KQDKAALAKTGVELMIV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaactcatttgagcgaagaaataaaattgtcgacctgattaatacgcaaggcagcgtg
ctggtgatggacctttcaaatacctttggtatttctgaagtgactatccgtgctgacctg
cgtctgctggaagagaaaggccttgtcacccgttttcatggcggcgcggcaaaaccggga
agtcatctggcggaaggcgacaatcaggaagtcattctggaagatcggtatcaactcgcc
agcgatccgaaaaagcggattgcccaggcggctgcggcaatggttgaagaaggaatgacc
atcattctggatagcgggagcacaacattactgattgcggaagcgctcgcgcgaaaaagc
aatattacggtgatcactaacagcttgcctgccgcttttacgctatcagaaaataaagat
ctcacgctggtggtctgcggcggtacggtacggcataaaacccactcaatgcacggcacg
attgcggaacgatcgctacacggcatcagcgccgatttaatgtttgtcggggcggatggc
attgatgcgacaaacggtattaccacgtttaacgaaggttattccattagcggcgtcatg
gcggcggcggcacacaaagttatcgcggtactggacgcgaccaaatttaaccgtcgcggc
tttaaccaggtattgccgatggacaagatcgactgtgtgataaccgatgacaccatcagc
aaacaggataaagcggcattagcgaaaacaggcgtggaattaatgatcgtctaa
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