Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_02780
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Entry
CFSAN001921_02780 CDS
T02737
Name
(GenBank) transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setc03000
]
CFSAN001921_02780
Transcription factors [BR:
setc03000
]
Prokaryotic type
Helix-turn-helix
Other families
CFSAN001921_02780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_3
GAF_2
AAA_5
AAA
HTH_8
AAA_16
Mg_chelatase
AAA_19
AAA_2
HTH_50
AAA_7
nSTAND3
PilB3_N
Motif
Other DBs
NCBI-ProteinID:
AGQ66889
LinkDB
All DBs
Position
complement(563395..565473)
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AA seq
692 aa
AA seq
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MSYTPMSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKRSALADSAGIVLWQAQSQRAQ
YYATRENGRPVEYEDETVLAHGPVRRILSRPDALHCNFHEFTETWPQLAASGLYPEFGHY
CLLPLAAEGRIFGGCEFIRQEDRPWSEKEYDRLHTFTQIVGVVAEQIQNRVNNNVDYDLL
CRERDNFRILVAITNAVLSRLDIDELVSEVAKEIHHYFNIDAISIVLRSHRKNKLNIYST
HYLDEHHPAHEQSEVDEAGTLTERVFKSKEMLLINLNERDPLAPYERMLFDTWGNQIQTL
CLLPLMSGKTMLGVLKLAQCEEKVFTTANLKLLRQIAERVAIAVDNALAYQEIHRLKERL
VDENLALTEQLNNVDSEFGEIIGRSEAMYNVLKQVEMVAQSDSTVLILGETGTGKELIAR
AIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLD
EVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYY
RLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNIDSIPAETLRTLSSMEWPGNVRE
LENVVERAVLLTRGNVLQLSLPDITAVTPDTSPVATESAKEGEDEYQLIIRVLKETNGVV
AGPKGAAQRLGLKRTTLLSRMKRLGIDKDALA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatacacccatgagcgatcttggacagcaaggcttgttcgatatcactcgtacc
ttattgcagcagcccgatttggcgtcgctcagtgaagcgctttcgcaactggtaaagcgt
tcagcgctcgccgacagcgccggcattgtgctatggcaggcgcagtcgcaacgcgcacaa
tattatgcgacgcgagaaaatggccgtcctgttgaatatgaagatgaaaccgtactggcg
cacggcccggtacgtcgcatcctttctcgccccgatgcattgcactgtaatttccatgag
tttaccgaaacctggccgcagcttgccgcgagcggcctctaccctgaatttggtcattac
tgtctgcttcctttagccgcggagggccgtattttcggcggctgcgaattcatccgtcag
gaagatcgcccctggagtgaaaaggaatatgaccgtctgcatacgtttacccaaattgtc
ggcgtggtcgccgagcaaattcaaaaccgggtaaacaataacgtcgattatgatctgttg
tgccgcgaacgcgataacttccgtattctggttgcgattaccaacgccgtcctgtcgcgt
ctggatattgatgaactggtaagcgaagtcgcaaaagagattcaccactatttcaatatc
gacgcgatcagcatcgtgttgcgcagccatcgcaaaaataagctgaatatctactccacc
cactaccttgatgagcatcatccggcgcacgaacagagcgaagtcgacgaagccggcacg
ctcacggagcgcgtctttaaaagtaaagagatgctgcttatcaacctcaacgaacgcgat
ccgcttgccccctacgaacgcatgctgttcgatacctggggcaatcagatccagacgctt
tgcctgctgccgttgatgtccggcaagacgatgcttggcgtgctcaaactggcccagtgc
gaagaaaaagtgtttaccaccgccaacctcaagctgctgcgtcagattgccgaacgggta
gccattgccgtggataatgcgctggcctatcaggaaatccaccgactgaaggaacgcctg
gtcgacgaaaacctggcgctcacggaacagcttaataacgtcgacagcgagtttggcgag
atcatcggacgcagcgaagcgatgtacaacgtgctaaagcaggttgagatggtggcgcag
agcgacagtaccgtgctgattctgggcgaaacgggaaccggtaaagagttgattgcccgc
gccattcacaacctgagcggacgtagcgggcgcaggatggtaaagatgaactgcgccgcg
atgccggcggggctgctggaaagcgatctgtttggtcatgagcgcggcgcgtttaccggc
gccagcgcgcagcggattggccgtttcgagctggcggataaaagctcgctgtttctggat
gaagtgggcgacatgccgctggagctacagcctaagctgctgcgcgtccttcaggagcaa
gagtttgaacgtctcggcagcaataaactgatccagaccgacgtgcggctgatcgccgcg
actaaccgcgatctgaaaaaaatggtcgccgatcgcgaattccgtaacgatctctactat
cggctgaatgtttttccgatccagcttcctccgttgcgcgaacgtccggaagatattcca
ctactggtcaaagcgttcactttcaaaatcgcccgccgaatggggcgtaatatcgacagc
attcccgccgaaacgctgcgcacgcttagcagcatggaatggccggggaacgttcgcgag
ctggagaatgtcgtcgagcgcgccgtgctgctgacgcgcggcaatgtgctacaactgtcg
ctgccggatattaccgccgtaacgcccgatacctcgcctgttgcgactgaaagcgccaaa
gaaggcgaagatgaatatcagcttattatacgcgtgctgaaagagaccaatggcgtagtg
gctggaccaaaaggcgcggcgcagcgtctggggcttaaacgaaccaccctgctgtcgcgt
atgaagcgattgggtattgataaagacgcgttagcgtaa
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integrated database retrieval system
