Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_03870
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Entry
CFSAN001921_03870 CDS
T02737
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFSAN001921_03870 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setc03019
]
CFSAN001921_03870 (rnc)
03009 Ribosome biogenesis [BR:
setc03009
]
CFSAN001921_03870 (rnc)
03036 Chromosome and associated proteins [BR:
setc03036
]
CFSAN001921_03870 (rnc)
Enzymes [BR:
setc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CFSAN001921_03870 (rnc)
Messenger RNA biogenesis [BR:
setc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFSAN001921_03870 (rnc)
Ribosome biogenesis [BR:
setc03009
]
Eukaryotic type
90S particles
RNase
CFSAN001921_03870 (rnc)
Prokaryotic type
rRNA processing factors
CFSAN001921_03870 (rnc)
Chromosome and associated proteins [BR:
setc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CFSAN001921_03870 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGQ67030
LinkDB
All DBs
Position
791215..791952
Genome browser
AA seq
245 aa
AA seq
DB search
MYQVCFVCWIVDAFIYWYRMNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLE
FLGDSILSFVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGEL
KSGGFRRESILADTVEALIGGVFLDSNIQTVEQLILNWYKTRLDEISPGDKQKDPKTRLQ
EYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALK
KLELE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcaggtctgtttcgtgtgctggattgttgacgcattcatttattggtatcgcatg
aaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcaggag
ctgttgcagcaggcattaactcaccgcagcgccagcagtaaacataacgaacgcctggaa
tttttaggcgattcaatcctgagcttcgttatcgctaacgcgctttatcaccgttttcca
cgggtggatgagggagatatgagccgtatgcgcgccacgttggtacgtggtaatacgctg
gcggaattagcccgtgaatttgatttaggcgagtgcctgcgtttagggccgggcgaatta
aaaagcggcggattccgtcgggagtccattctggcggacaccgttgaagcgttaatcggc
ggagtatttctcgatagtaatatccagaccgtcgagcagttaatccttaactggtataaa
acccgtctggatgagataagtccgggcgataaacaaaaagatccgaaaacgcgcttgcag
gagtatttgcagggtcgccatctgccgctgccatcttacctggttgtgcaggtacgcggc
gaggcgcacgatcaggaatttactatccactgccaggtcagcggcctgagcgaaccggtg
gttggcacgggttccagccgtcgtaaggcggagcaggctgccgccgaacaggcgctgaaa
aaactggagttggaatga
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integrated database retrieval system
