Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_08330
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Entry
CFSAN001921_08330 CDS
T02737
Name
(GenBank) DNA-binding protein
KO
K03746
DNA-binding protein H-NS
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setc03036
]
CFSAN001921_08330
03400 DNA repair and recombination proteins [BR:
setc03400
]
CFSAN001921_08330
Chromosome and associated proteins [BR:
setc03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CFSAN001921_08330
DNA repair and recombination proteins [BR:
setc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFSAN001921_08330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
PaaX_C
DUF6626
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
AGQ67756
LinkDB
All DBs
Position
complement(1711249..1711662)
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AA seq
137 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ
YREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIK
KAMEEQGKQLEDFLIKE
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattctgaacaacatccgtactcttcgtgcgcaggcaagagaa
tgtactctggaaacgcttgaagaaatgctggaaaaattagaagttgtcgttaatgagcgt
cgtgaagaagaaagcgctgctgctgctgaagtggaagaacgcactcgtaaactgcaacag
tatcgtgaaatgttaattgccgacggcattgacccgaatgaactgctgaatagcatggct
gccgctaaatccggtaccaaagctaaacgcgcagctcgtccggctaaatatagctatgtt
gacgaaaacggtgaaactaaaacctggactggccagggtcgtacaccggctgtaatcaaa
aaagcaatggaagaacaaggtaagcaactggaagatttcctgatcaaggaataa
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