Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_11820
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Entry
CFSAN001921_11820 CDS
T02737
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setc02000
]
CFSAN001921_11820
Transporters [BR:
setc02000
]
Other transporters
Pores ion channels [TC:
1
]
CFSAN001921_11820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AGQ68310
LinkDB
All DBs
Position
2402814..2403923
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AA seq
369 aa
AA seq
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MLSRWRYSWRILDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHD
TGFIHNDGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLT
AKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPVFAGGIEYAITPEIA
TRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTL
KSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKR
AQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGV
KDVVTQPQA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
gtgttatctcgttggagatattcatggcgtattttggatgataacgaggcgcaaaaaatg
aaaaagacagctatcgcgattgcagtggcactggctggtttcgctaccgtagcgcaggcc
gctccgaaagataacacctggtacgctggtgctaaactgggctggtctcagtaccatgac
accggcttcattcacaatgatggcccgactcatgaaaaccaactgggcgcaggtgctttt
ggtggttaccaggttaacccgtatgttggctttgaaatgggctacgactggttaggccgt
atgccgtacaaaggcgacaacatcaatggcgcttataaagctcagggcgttcagttgacc
gctaaactgggttatccaatcactgacgatctggacgtttatacccgtctgggtggtatg
gtatggcgtgcagacaccaagtctaacgtccctggcggcccgtctactaaagaccacgac
accggcgtttccccggtattcgcgggcggtatcgagtatgctatcacccctgaaatcgca
acccgtctggaataccagtggactaacaacatcggtgatgccaacaccatcggcacccgt
ccggacaacggcctgctgagcgtaggtgtttcctaccgtttcggccagcaagaagctgct
ccggtagtagctccggcaccagctccggctccggaagtacagaccaagcacttcactctg
aagtctgacgtactgttcaacttcaacaaatctaccctgaagccggaaggccagcaggct
ctggatcagctgtacagccagctgagcaacctggatccgaaagacggttccgttgtcgtt
ctgggcttcactgaccgtatcggttctgacgcttacaaccagggtctgtccgagaaacgt
gctcagtctgttgttgattacctgatctccaaaggtattccgtctgacaaaatctccgca
cgtggtatgggcgaatctaacccggttaccggcaacacctgtgacaacgtgaaacctcgc
gctgccctgatcgattgcctggctccggatcgtcgcgtagagatcgaagttaaaggcgtt
aaagacgtggtaactcagccgcaggcttaa
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integrated database retrieval system
