Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_12660
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Entry
CFSAN001921_12660 CDS
T02737
Name
(GenBank) DeoR family transcriptional regulator
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setc03000
]
CFSAN001921_12660
Transcription factors [BR:
setc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CFSAN001921_12660
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
TMEM210
Acyl_CoA_thio
TARSH_C
Motif
Other DBs
NCBI-ProteinID:
AGQ68432
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Position
complement(2576908..2577528)
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AA seq
206 aa
AA seq
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MKENAVRRANDPKRREKIIQATLEAVKTYGVHAVTHRKIAAIAQVPLGSMTYYFAGMDAL
LSEAFTLFTENMSRQYQDFFAQVTDAEGACQAITEMIYGSQVTTPDNMALMYQLYAYASD
KPALKIVMQNWMQRSQNTLAQWFDAQTARALDAFIEGMTLHFVTDRTPLAREAILQMVKR
IAGVSMSCHSALGNKKPTNLEPKWRG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaatgccgtaagacgcgccaatgatcctaagcgacgggaaaaaataattcag
gccacactggaagcggtaaagacctatggcgttcatgccgtgacgcaccggaaaatcgcc
gctatcgctcaggtgccgcttggctcgatgacctactattttgccggtatggatgcgtta
ttgagtgaagcttttacacttttcaccgagaacatgtcgcgtcaataccaggactttttt
gcgcaggtgacggatgcggagggggcgtgccaggcgataacggaaatgatttacggctcg
caggttacgacgccggataatatggcgttaatgtatcagttatatgcctatgccagcgat
aagccggcgttaaaaatagtcatgcaaaactggatgcagcgtagccagaatacgctggcg
cagtggtttgacgcacagaccgcccgagcgctggatgcgtttatcgaggggatgacgctg
cattttgtaacggatcgaacgccgctggcgcgtgaagcgattttacagatggtaaagcga
atcgccggagtgtcaatgtcgtgtcactctgcgttgggcaacaaaaaacccaccaacctt
gaaccgaaatggcggggttga
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