Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_15950
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Entry
CFSAN001921_15950 CDS
T02737
Name
(GenBank) type IV secretion protein Rhs
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TreTu_C
DUF6531
PAAR_motif
TEN_YD-shell
RHS
TM7S3_TM198
DUF2552
Motif
Other DBs
NCBI-ProteinID:
AGQ70752
LinkDB
All DBs
Position
complement(3230221..3234315)
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AA seq
1364 aa
AA seq
DB search
MYEAARVDDPIYHTSALAGFLIGAIIGIAIIALAAFAFFSCGFLAGLILGFMADQIASGV
LQLGEAIGRSIHHTAGKILTGSENVSTNSRPAARAVLSTVKCDNHIAEKRIAQGSENIYI
NSQPAARKDDHTECDAVIEDGSPNVFLGGGTQTVLEISSEIPDWLRKVVDVLFVVASLLG
GLAGAWRQAAKLGTKFGTKCAAKFIGGELVGMAVGEAISGLFSNPVDVTTGQKILLPETD
FTLPGRLPVTCSRFYASHLETVGLLGRGWRLNWETSLRDDDEHITLTGVQGRELRYPKTM
LTPGHQIFDPEEQLYLSRLHDGRYVLHYTDRSYYVFGDFDSDGMAYLLFMETPHRQRIVF
GHEGGRLVRIASSSGHHLLLHRTQTPAGERLSRIELVQGGTRGNLVEYRYDDNGQLTGVV
NRAGTQVRQFAYENGLMTAHSNATGFTCRYRWQELDGAPRVTEHDTSDGEHYRFDYDFAA
GTTTVTGRQGETWQWWYDRETYITAHRTPGGGMYRFTYNEDHFPVNIELPGGRTVAYEYD
IQNRVVKTTDPEGRVTQTQWNGEFDEITRTALDDDAVWKTQYNAHGQPVQETDPEGRVTQ
YAYDEQGQMCSRTDAAGGTVVTAFDSRGQMTRYTDCSGRSTGYDHDEDGNLTRVTDAEGK
VVRISYNRLGLPETVNSPGKQQDRYTWNALGLMSSHRRITGSVESWRYTPRGLLAAHTDE
EKRETRWQYTPEGRVAALTNGNGAQYRFSHDADGRLVREVRPDGLSRTFILDDSGYLTAI
QTTGTQGGVRRETQQRDALGRLLRTENEHGQRTFSYNRLDQITAVTLTPTEAGQQQHRMQ
ADTVRFEYDRSGWLTAEHAGNGSICYQRDALGNPTDITLPDGQHLTHLYYGSGHLLQTAL
DGLTVSEYERDSLHRQIMRTQGQLATYSGYDDDGLLSWQRSLASGSAPVLPGQRPARQGC
VTSRDYYWNNHGEVGTIDDGLRGSVVYSYDRSGYLTGRSGQMYDHDRYYYDKAGNLLDNE
GQGAVMSNRLPGCGRDRYGYNEWGELTTRRDQQLEWNAQGQLTRVISGNTETHYGYDALG
RRTRKATYGRHTGHTARSRTDFVWEGFRLLQENVQQQGWRTYLYDAEQPYTPVASVTGRG
ESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIRGFGENAADISNSGAYFHQPLRLPGQYF
DDETGLHYNLFRYYAPECGRFVSQDPIGLRGGLNLYQYAPNPLKYIDPLGLTATVGRWMG
PAEYQQMLDTGTVVQSSTGTTHVAYPADIDAFGKQAKNGAMYVEFDVPEKSLVPTNEGWA
KIVGPDSIEGRLAKRKGLPVPEMPTAENITVRGEKINGEVEAKC
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagcagcccgtgtggatgatcctatctaccacaccagcgcgctcgccgggttt
cttatcggcgctatcatcggcatcgccattatcgcgcttgccgcctttgccttctttagc
tgcggttttcttgccgggctgattctgggttttatggccgatcaaatagcctccggggta
ttgcaactgggcgaggccatcgggcgctccatccaccacacggcaggaaaaatcctcacc
ggttcggagaatgtcagcaccaacagtcgcccggcggcgcgcgcggtactgagtacggtg
aaatgcgataaccatatcgcagaaaaacgcatcgcccaagggtcggaaaatatctacatc
aacagccagcccgccgcccgtaaggatgaccacaccgaatgcgacgcggtgattgaagac
ggttcgccgaatgtgtttctcggcggcggcacacagacggtactggaaatcagttctgaa
attccggactggctgcgcaaggtggtggatgtattgtttgtcgtggcgagtctgctcggc
gggctggccggggcgtggcggcaggcggcaaagctggggacgaaatttggcactaaatgt
gccgctaagtttatcggcggggagcttgtcgggatggccgtgggtgaggctatcagcggg
ctgttcagcaatccggtggatgtgaccaccgggcagaaaatcctgctgccggaaacggac
ttcaccctgcccggtcgcctgccggtcacctgctcgcgtttttacgccagccacctggaa
actgtgggactgttgggacggggctggcggctgaactgggaaaccagcctgcgcgatgac
gatgaacacatcacgctgaccggcgtacaggggcgggaactgcgttacccgaaaacgatg
ctgacgcccggccaccagatatttgacccggaagaacagttatacctcagccgcctgcat
gacgggcgttacgtgctgcattacaccgatcgcagctattacgtatttggtgattttgac
agtgacggcatggcatacctgctgtttatggagacgccgcaccgccagcgcattgtcttc
gggcacgaaggaggcagactggtacggatagcctccagcagcgggcatcacctgttactg
caccgcacacagaccccggcaggggagcggctgtcgcgaattgaactggtgcagggcggc
acccgtggcaatctggtggagtaccggtatgacgataacggtcaactgaccggcgtggtg
aaccgggcgggaacgcaggtgcgtcagtttgcttatgaaaacgggctgatgacggcgcac
agcaatgcgacggggttcacctgccgctaccgctggcaggaactcgacggcgcgccgcgc
gtgacggagcacgacaccagtgacggcgaacattaccgctttgactatgattttgccgca
ggcaccaccaccgtcaccggcaggcagggggagacatggcagtggtggtacgacagggaa
acgtatatcaccgcgcaccggacgccgggcggtggaatgtaccgcttcacgtacaacgaa
gaccacttccctgtcaacattgagctgcccggcggtcgcacggtggcgtatgaatatgac
atccagaaccgggtggtgaagacgacagatccggaaggccgggtgacgcagacgcagtgg
aacggcgagttcgacgaaatcacgcgcacggcgctggacgatgacgctgtctggaaaacg
cagtacaacgcccacggccagccagtgcaggagacggacccggaagggcgggtgacgcag
tacgcttacgatgaacaggggcagatgtgcagccggacggatgcggcgggcggcacggtg
gtgacggcgttcgacagccgggggcagatgacgcggtacaccgactgttcagggcgcagc
acaggatatgaccacgatgaggacggcaacctgacgcgggtgacggacgcggaagggaag
gtggtacgcatcagctacaaccgacttgggttgccggagacggtaaactcaccggggaaa
cagcaggacaggtatacctggaatgcgctggggctgatgagcagccaccggcgcatcacg
gggagcgtggagagctggcggtatacgccgcgcggtctgctggcggcgcacacggatgag
gagaagcgcgagacgcgctggcagtacacgccggaaggccgggtggcagcgctgaccaac
ggcaacggggcgcagtaccggttcagtcacgatgcggacggcaggctggtgcgtgaggtt
cgcccggacggactgagccgtacttttatcctggacgacagcggttatctgacggcgata
cagaccacgggcacgcagggcggcgtgcggcgggagacgcagcagcgggatgcgctgggc
cgtctgttacggacggagaatgaacacggccagcggacgttcagctacaaccggctggac
cagataacggcagtgacgctcacgcccacggaggcggggcaacagcagcaccggatgcag
gccgacacggtgcgttttgagtatgaccgcagcggctggctgacggcggagcacgcgggg
aacggtagcatatgttatcagcgcgacgcgctgggcaacccgacggacatcacgctgccg
gacgggcagcacctgacgcatctgtattacgggagcgggcatctgttacagacggcgctg
gacggcctgacggtgagcgagtatgagcgcgacagcctgcaccgtcagataatgcgcacg
caggggcagcttgcgacgtacagcggctatgacgacgacgggctgctgagctggcagcgc
agtctggcgtccggcagtgcccctgttcttcctggccagcgcccggcgcggcagggctgc
gtgacgtcgagggactattactggaacaaccacggcgaggtgggcacgattgacgacggc
ctgcgtggcagcgtggtgtacagctatgacagaagcggttacctgaccgggcgctcaggt
cagatgtatgaccatgaccgttattattacgataaggcgggcaacctgctggataacgaa
gggcagggagcggtgatgagcaaccggctgccgggctgtggtcgtgaccgttacggctat
aacgagtggggcgagctgaccacgcggcgcgaccagcaactggagtggaacgcgcagggg
cagctgacgcgggtcatcagcggcaacacggagacgcactacggctacgatgcgctgggg
aggcgaacccgcaaggcgacgtacgggcggcacacgggccatacggcgcggagccggacg
gactttgtgtgggaggggttcaggctgttgcaggagaacgtgcagcagcagggctggcgg
acctatctgtacgatgcggaacagccgtacacgccggtggcgagcgtgacggggcgggga
gaaagcaggcaggtgtggtattaccacacggatgtgacgggcacgccgcaggaggtgacg
gcggcggacggaacgctggtgtgggcggggtatatcagggggtttggagagaatgcggcg
gacatcagcaacagcggggcgtactttcaccagccgctgcggctgccggggcagtatttt
gacgacgagacagggctgcattacaatctgttcagatattatgcaccggagtgtggacgg
tttgtcagtcaggatccgatcgggctgaggggcgggttaaacctttatcagtatgcgcca
aatcctctcaaatatatagacccacttggtttaaccgcgactgttgggcgatggatgggg
cctgcggaatatcagcaaatgcttgatactgggacagtagtacaaagttcaacagggaca
actcatgttgcctaccctgctgatatagatgcttttggtaagcaagcaaaaaatggtgct
atgtatgttgaatttgatgtgcctgaaaaatcattagtacctacaaatgaaggatgggca
aaaatagtagggccagattctatcgaagggcgattagctaaacgcaaaggtttgcctgtt
cctgaaatgccaacagcagaaaacataactgtaaggggcgagaaaattaatggggaagtt
gaagcaaaatgctaa
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