KEGG   Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_16010
Entry
CFSAN001921_16010 CDS       T02737                                 
Name
(GenBank) Hcp1 family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
setc  Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:setc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CFSAN001921_16010
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:setc02044]
    CFSAN001921_16010
Secretion system [BR:setc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CFSAN001921_16010
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AGQ68938
LinkDB
Position
complement(3247702..3248187)
AA seq 161 aa
MSYDIFLKIDGIDGESMDDKHKNEIEVLSWRWNIHQESTMHAGSGLGSGKVSVTNLSFEH
YIDRASPNLFKYCSSGKHIPQAILVMRKAGGNPLEYLKYTFTDLIIAMVSPSGSQGGEIA
SRESIELSFSTVKQEYVVQNQQGGSGGTITAGYDFKANKEI
NT seq 486 nt   +upstreamnt  +downstreamnt
atgtcttatgacatttttctgaaaattgacggcattgacggcgagtcaatggatgacaaa
cacaaaaatgaaattgaagtactgagctggcgctggaatattcatcaggaatccaccatg
cacgccggtagcggtctcggttccggtaaggtctccgtcactaatctttcatttgaacat
tacatcgatcgcgccagcccgaacctgttcaaatactgctcttccggtaagcacattccg
caggccattctggttatgcgtaaggctggcggcaatccgctggagtacctcaagtacact
ttcacagatctgattattgcaatggtatcgcccagcggaagccagggaggggaaattgcg
tctcgcgaatcaattgaactctccttcagcaccgtgaagcaggaatacgtggtgcagaac
cagcagggtggcagcggcggcaccatcaccgcaggctacgacttcaaggccaacaaagaa
atttaa

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