KEGG   Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_20290
Entry
CFSAN001921_20290 CDS       T02737                                 
Name
(GenBank) hypothetical protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
setc  Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:setc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:setc03000]
    CFSAN001921_20290
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:setc02048]
    CFSAN001921_20290
Transcription factors [BR:setc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    CFSAN001921_20290
Prokaryotic defense system [BR:setc02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    CFSAN001921_20290
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_19 ForC_N Sulf_coat_C HTH_26 BetR
Other DBs
NCBI-ProteinID: AGQ70899
LinkDB
Position
4187542..4187970
AA seq 142 aa
MDATSAKKIVDTFSDAVKTVPLMGEDRNDNEYRRALALVEFLVDHDDLENPLFELLCARI
SEYEKHAPEFKALNQHLEKTPPGVSVLRTLMDQYGLKAADLANELGSKSNVSNILNGRRA
LTVNHIKALTQRFKLPADAFIE
NT seq 429 nt   +upstreamnt  +downstreamnt
atggatgcaaccagcgcaaaaaagatcgttgataccttcagcgatgcggtaaaaaccgtc
ccactgatgggggaagaccgaaatgacaatgagtatcgcagggcactagcgctagtggag
tttctggtcgaccacgacgatcttgaaaacccactatttgaattgctctgtgcccgaatc
agtgaatacgaaaaacatgcgccggaattcaaagcactcaaccaacacctggagaaaacg
ccccctggcgtttcagtattgcgaacgctcatggatcaatacggtctcaaagcagcagat
cttgccaacgaacttggttctaaatcgaacgtcagcaacatcttaaatggccgcagagca
ctaacggttaatcatattaaagcgcttacacaacgcttcaaactaccagcagatgccttc
atcgagtag

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