Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_20315
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Entry
CFSAN001921_20315 CDS
T02737
Name
(GenBank) DeoR family transcriptional regulator
KO
K27243
DeoR family transcriptional regulator, sulfoquinovose operon repressor
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setc03000
]
CFSAN001921_20315
Transcription factors [BR:
setc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CFSAN001921_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
MarR
MarR_2
GntR
HTH_Crp_2
HTH_20
Fe_dep_repress
HTH_29
HTH_24
HTH_Mga
HTH_5
TrmB
Rrf2
DDRGK
Sugar-bind
RPA_C
SgrR_N
HTH_36
CoA_trans
HTH_28
HTH_17
HTH_12
HTH_PafC
TFIIE_alpha
DprA_WH
DUF1670
HTH_AsnC-type
MerR
CggR_N
DUF4423
DnaD_N
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGQ69625
LinkDB
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Position
complement(4191061..4191864)
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AA seq
267 aa
AA seq
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MSLTELTGNPRHDRLLMLIDERGYMNIDELASLLEVSTQTVRRDIRKLSEQGLITRHHGG
AGRASSVVNTAFEQREVSWTQEKKAIAEAVADYIPDGSTIFITIGTTVEQVARALLNHNH
LRIITNSLRVAHILYNNPRFEVMVPGGTLRPHNSGIIGPSAAAFVAGFRADYLVTSVGAI
ESDGALLEFDVNEASVVKTMMAHSRHILLAADHTKYHASAAVEIGNVSQITALFTDEYPG
PALQNLLQSQQIEVVQVSPSLDDAVSA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttaccgaactgaccggtaatccgcgacacgatcggctgttaatgctaattgat
gagcgcggctatatgaatatcgatgagttagccagtttgttggaggtctctacccagacg
gttcgccgcgatattcgtaaattaagcgagcaggggctgattacgcgtcatcacggcggc
gctggcagagcgtccagtgtggtcaataccgcctttgagcagcgagaggtctcctggacg
caagagaaaaaagccattgcggaagccgtggctgactatattccggatggctccacgata
tttatcacgattggaacgacggttgagcaggtggcgcgcgcgctgctcaaccataatcat
ctgcgcattatcaccaatagcctgcgcgtcgcgcacattctttataataaccctcgtttt
gaagtgatggtgcctggcggcacgctgcgcccgcataatagcggcattatcgggccatcc
gcggcggcgtttgtggcggggttccgggctgactatctcgtcaccagcgtaggcgcgata
gagagcgatggcgcgttactggagtttgatgtcaacgaagccagcgtagtgaaaaccatg
atggcccactcgcgacatattttgctggccgccgatcatacgaaataccatgcttctgcg
gcggttgagatcggcaatgtgtcacagattaccgctctgtttacggacgagtatcccggt
ccggcattacagaatttacttcaatcccagcaaatcgaagtggttcaggtgagtccttcg
ctggacgacgccgtttcagcgtga
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