Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_20680
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Entry
CFSAN001921_20680 CDS
T02737
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc03420
Nucleotide excision repair
setc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFSAN001921_20680 (uvrD)
03430 Mismatch repair
CFSAN001921_20680 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setc03400
]
CFSAN001921_20680 (uvrD)
Enzymes [BR:
setc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFSAN001921_20680 (uvrD)
DNA repair and recombination proteins [BR:
setc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFSAN001921_20680 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CFSAN001921_20680 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGQ69683
LinkDB
All DBs
Position
complement(4269725..4271887)
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AA seq
720 aa
AA seq
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MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLSVENNSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQM
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQVCRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPLAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgataaacagcgcgaagcggtggccgcg
ccacgtagcaacatgctggtgctggcgggcgcgggaagcgggaaaacccgcgtgctggtg
caccgtatcgcctggttactgagcgtagaaaacaactcgccatattccatcatggcggtg
acctttaccaataaagcggcggcggaaatgcgccatcgtattggccagttgatggggacc
agccagggcggaatgtgggtagggacgttccacggtctggcgcaccgcctgctgcgcgcg
catcatatggacgctaatttgccgcaggatttccagattctcgacagcgaagatcagatg
cgtttgcttaaacgcctgattaaggcgatgaatcttgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaatagccagaaagacgaagggctacgcccgcaccatatccaa
agctatggcaacccggtggagcagacctggcagaaggtgtatcaggcctatcaggaagcg
tgcgatcgcgctggtctggtggattttgccgagctactgctgcgcgctcatgaactatgg
ctgaacaagccgcacatcctgcaacactatcgcgagcggtttactaacatcctggtggac
gaattccaggataccaacaacattcagtacgcctgggttcgtctgctggcgggcgatacc
ggtaaggtgatgattgtcggcgacgatgaccagtcgatctacggctggcgcggggcccag
gtagagaacatccagcgcttcctcaatgatttccccggcgcgcagaccattcgtctggag
cagaattaccgctcgaccagcaacatccttagcgcggcgaacgctctgattgagaataac
aatgggcgtttgggtaaaaagctgtggactgacggcgttgacggcgaaccgatatcgctg
tactgcgctttcaacgaactggatgaagcgcgctttgtggttaaccgtatcaaaacctgg
caggacaacggcggcgcgcttgcgcaatgcgccattctttatcgcagcaacgcccagtcg
cgcgtgctggaagaagcgttattacaggccagtatgccgtaccgcatttacggcggtatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcttatctgcgtttgattgccaat
cgcaacgatgatgccgcctttgaacgcgtggtgaataccccaacgcgcggtatcggcgac
cgcacgctggacgtggtgcgccagacctcgcgcgatcgccagctaacattgtggcaggtg
tgccgtgaattgttacaggaaaaagccctggccgggcgtgcggccagcgcgctgcaacgc
tttatggaactgatcgacgccctggcgcaggaaaccgccgacatgccgctgcatgtgcag
actgaccgggtgatcaaagattccggcctgcgcaccatgtatgagcaagaaaaaggcgag
aaaggccagacgcgcatcgaaaacttagaggaactggtgacggcaacgcggcagttcagc
tacaacgacgaagatgaagatttgatgccgttgcaggccttcctctctcacgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggatgcggtacagctgatgacgctgcac
tcggccaaaggcctggagtttccgcaggtgtttatcgtcgggatggaagaggggatgttc
cccagccagatgtcgctggatgagggcgggcgtttggaagaggagcgtcgtctggcctac
gtcggcgttacccgtgccatgcagaaactgacgctaacctatgccgaaactcgccgtctg
tatggtaaagaggtttatcatcgcccgtcgcgtttcatcggcgagttgccggaggagtgc
gtggaagaggtccgtctgcgcgccaccgtcagtcgtccggtgagccatcaacgaatggga
acgccgctggcggaaaacgacacaggctacaaactcggccaacgcgtgcgccatgcgaag
ttcggcgagggaactattgtcaacctggagggcagcggcgagcatagccggttgcaggtg
gcttttcaggggcaagggatcaaatggctggttgccgcgtatgcgaagctggaaacggtt
tga
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