Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_21825
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Entry
CFSAN001921_21825 CDS
T02737
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc00540
Lipopolysaccharide biosynthesis
setc01100
Metabolic pathways
Module
setc_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CFSAN001921_21825
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
setc01005
]
CFSAN001921_21825
Enzymes [BR:
setc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
CFSAN001921_21825
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
CFSAN001921_21825
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
CFSAN001921_21825
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
CFSAN001921_21825
Lipopolysaccharide biosynthesis proteins [BR:
setc01005
]
Lipid A
CFSAN001921_21825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_4_4
PCC_BT
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
AGQ69856
LinkDB
All DBs
Position
complement(4506813..4508090)
Genome browser
AA seq
425 aa
AA seq
DB search
MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRRPLKPGGIMLHSVSVGE
TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGNDVQHVYLPYDLPDALNRFLNK
IDPKLVLIMETELWPNLIAALHKRHIPLVIANARLSARSAAGYAKLGKFVRTLLRRITLI
AAQNEEDGERFVALGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATST
HDGEESIVIAAHQALLHQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSAS
TQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA
RLDQASGLITITDAATLAKEVSSLLTDADYRNFYGRHAVEVLYQNQGALQRLLQLLEPYL
PPKTH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaattgctttacaccgctcttctctaccttattcagcctctgatctggatacgg
ctttgggtgcgtggacgtaaagcgccggcctatcgtaagcgctggggtgaacgctacgga
ttctaccgccgtccgttgaaaccgggcggaatcatgctgcattccgtctcggtgggcgaa
actctggcggccatcccattggtccgcgctctacgtcatcgctatcccgatctgcctatt
accgtaacgaccatgacgccgaccggctcggagcgcgtccagtccgcctttggcaacgat
gttcagcacgtttacttgccttatgatttgcccgatgcgctcaatcgtttcctcaataag
attgatcctaagctggtattgatcatggagactgagctctggccaaatctgattgctgcg
ctgcacaaacgtcatattcccctggttatcgctaatgcgcggctttccgcccgctccgcc
gcgggttatgcgaagcttggcaagtttgtccgtacgctcttgcgccgtatcaccctgatt
gccgcgcaaaacgaagaagatggcgaacgctttgtggcattgggcgcgaagaacaatcag
gtcacggtcaccggcagtctgaaatttgatatttcagttacgccgcagctggcggctaaa
gccgttacgctacgccgccagtgggcgccgcaccgtccggtctggattgccaccagcacc
cacgatggcgaagagagtatcgttatcgccgctcaccaggcgttattacatcaattcccg
aatttattactgattctggtgccccgccatccggagcgtttcccggatgctatcaatctt
gtgcgtcaggcagggttaagctacatcactcgttcttcgggcgaagtaccgtccgccagc
acccaggtcgtggtaggcgataccatgggcgaattaatgttgctctatggcattgccgat
ctcgcctttgttggtggttcgctggttgaacgcggcggtcataacccgctggaggccgcc
gctcatgcgattccggtactgatgggtccgcatacctttaactttaaagatatttgcgcc
cgtctggatcaggcgagcggacttatcacgattaccgatgcggctacgctggcaaaagaa
gtttcctctttactgaccgacgctgattatcgtaatttctacggacgtcacgcagttgaa
gtgctgtatcaaaatcagggcgcgctccagcgtctgctgcaactgctggaaccttatctg
ccaccgaaaacgcattga
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