Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_21980
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Entry
CFSAN001921_21980 CDS
T02737
Name
(GenBank) transcriptional regulator
KO
K14348
GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setc03000
]
CFSAN001921_21980
Transcription factors [BR:
setc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CFSAN001921_21980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_Crp_2
HTH_29
Rrf2
TFIIE_alpha
HTH_41
HTH_24
HTH_11
DUF5817_CT
PaaX
Motif
Other DBs
NCBI-ProteinID:
AGQ69882
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All DBs
Position
complement(4539089..4539865)
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AA seq
258 aa
AA seq
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MIVMPKRLSDEIASRVRALIEEQNLEAGMKLPAERQLALQLGVSRNSLREALAKLVSEGV
LVSRRGGGTFVRWQHETWSEQNIVQPLKMLMANDPDYSFDILEARHAIEASTAWHAAMRA
TAADKEKIRLCFDATLSEDPDLASQADVRFHLAIAEASHNVVLLQTMRGFFDVLQSSVKQ
SRQRMYLVPPVFSKLTEQHQAVMDAILDGNAEGARKAMMAHLSFVHTTIKRFDEDQARQA
RITRLPGDHNEMTRENKS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtgatgccaaaacgcctgtcagacgagattgcctctcgcgtgcgggcgctgatt
gaagaacaaaacctggaagcgggcatgaaattgcccgccgagcgccagttggctctacag
cttggcgtatcacgcaactctttacgcgaagcgctggcgaagctggtcagtgaaggcgtg
ctggtgagtcgtcgcggcggcgggacatttgtccgctggcagcacgaaacctggtctgaa
cagaatatcgtgcaaccgctgaaaatgctgatggcgaacgatccggactacagtttcgac
attctggaagcccgccacgccattgaagccagtacggcctggcacgccgccatgcgtgcc
accgctgccgacaaagagaaaatcagactctgctttgatgcgacgctcagcgaagacccg
gatctcgcctcccaggccgacgtgcgctttcatctggcgatcgcggaagcctcgcacaat
gtggtgctgttgcaaaccatgcgcggtttcttcgacgtcctgcaatcctccgtcaaacag
agtcgccagcgtatgtatctcgttccgcccgtattctcaaagctgacggaacaacaccag
gcagtgatggacgccattctggacggtaacgccgagggcgcgcgtaaagcgatgatggcg
cacctcagttttgtccacaccacgattaaacgatttgatgaagaccaggcccgccaggcg
cgtattacccgcctgcccggcgaccataatgagatgaccagggagaataaatcatga
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