Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_23750
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Entry
CFSAN001921_23750 CDS
T02737
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
setc03032
]
CFSAN001921_23750
03036 Chromosome and associated proteins [BR:
setc03036
]
CFSAN001921_23750
03400 DNA repair and recombination proteins [BR:
setc03400
]
CFSAN001921_23750
DNA replication proteins [BR:
setc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFSAN001921_23750
Chromosome and associated proteins [BR:
setc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CFSAN001921_23750
DNA repair and recombination proteins [BR:
setc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CFSAN001921_23750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AGQ71013
LinkDB
All DBs
Position
unnamed:14319..14591
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AA seq
90 aa
AA seq
DB search
MNKSELIMKVAEDADISKAKAEAAVNALINSVTEELKAGGTVALTGFGTFHVKERAARTG
RNPKTGENIQIAAANIPGFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtgaactgattatgaaagtggccgaagacgctgacattagcaaagcaaag
gccgaagctgcggtaaatgcgctgatcaactcagtgacagaggagcttaaagcgggtggg
acagtagcgctcactgggtttggtactttccacgttaaggaacgcgcagcgcgaaccggg
cggaatcccaagactggagagaacatccagatcgcggcggccaacattcctgggttcaaa
gctggtaaggggttgaaagactccgtgaactag
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