Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_24795
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Entry
CFSAN001921_24795 CDS
T02737
Name
(GenBank) DNA-binding protein
KO
K03746
DNA-binding protein H-NS
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setc03036
]
CFSAN001921_24795
03400 DNA repair and recombination proteins [BR:
setc03400
]
CFSAN001921_24795
Chromosome and associated proteins [BR:
setc03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CFSAN001921_24795
DNA repair and recombination proteins [BR:
setc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFSAN001921_24795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF382
Birna_VP3
Intron_maturas2
Med21
Motif
Other DBs
NCBI-ProteinID:
AGQ71243
LinkDB
All DBs
Position
unnamed:complement(219356..219775)
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AA seq
139 aa
AA seq
DB search
MKDHEEFSTLSAAERRELIIAELKRKSRIRTLLRGLPLDEVREIIDRMKGVLNELEEEYK
KREEEEKEKRAQAERIMSDMESCGVDIGLLNEMFTSRSEPDNAKYSKDGVSWSGQGRRPD
AFKGLGAVELERYRIPQKK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccacgaggagttctctacgctatcagcggctgaacgtagagagttaataatc
gcagagttaaagcgtaaaagccgcattcgcaccctgttgcgaggactcccgttagatgaa
gttcgggagatcattgacagaatgaagggcgttctcaatgaactggaggaagagtacaaa
aagcgagaagaagaagaaaaagaaaagcgagctcaggctgagcgaataatgagcgacatg
gaatcctgcggtgtggacatcggcttgctcaacgaaatgttcacgagcagatcagaacct
gataatgctaaatattcaaaagacggagtttcgtggagtgggcaaggacgtcgcccggat
gctttcaaggggttgggagctgtcgagctggagcgctaccgtatcccacagaagaagtaa
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