Suncus etruscus (white-toothed pygmy shrew): 125994792
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Entry
125994792 CDS
T09902
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125994792 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
125994792 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125994792 (PDLIM1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125994792
NCBI-ProteinID:
XP_049620272
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All DBs
Position
17:complement(39181237..39229815)
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AA seq
329 aa
AA seq
DB search
MAAQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDIITAIDGENTSN
MTHLEAQNKIKGCIDNMTLTVTRSEHKVWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASSSSPRVITNQYNNPAGLYSSENISNFNNVLESKTAASGEETNGRVLD
PSQPPSGLIINKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPTGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRERHRHPECYVCHDCGTNLKQKGHFF
VEDQIYCEKHARERITPPEGYDVVAVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccagcagatcgtgctccaaggcccgggtccctggggcttccgactcgtgggg
ggcaaagacttcgagcagccgctggccatttctcgggtcactcctggaagcaaggctgct
atagcaaatctatgtattggagatataatcacagccattgatggggaaaatactagcaat
atgacacacttggaagctcagaacaaaattaaaggctgcatagacaacatgactctcaca
gtaaccagatctgaacataaagtctggtctcctttggtgacagaggaagggaaacgtcac
ccatacaagatgaatctagcttcggaaccccaagaggtcctgcatataggaagtgcccat
aaccgaagtgccatgcctttcactgcatcacccgcctctagctcttcccccagggtcatc
acgaaccagtataacaacccagctggtctctattcctctgaaaacatctccaacttcaac
aacgtcttagagtccaagacagcagcaagcggggaggagacaaatggccgagtcttagac
ccctctcaacctccaagtggactcatcatcaacaaggaatctgaagtttacaagatgctt
caggagaaacaggagttgaatgagcccccgaaacagtccacttccttcctggttttgcag
gaaatccttgagtctgaggagaaaggagatcccaacaagcccactggtttcagaagtgtt
aaggctccagtcaccaaagtggctgcatcaataggaaatgcccagaagttgcccatgtgt
gacaaatgtggcactggcattgttggtgtgtttgtgaagctgcgagaacgtcaccgacac
cctgagtgttatgtgtgccatgactgtggtaccaatctgaaacagaagggccattttttt
gtggaggatcaaatctactgtgaaaagcatgctcgggagcggattacccctcctgagggc
tatgacgtggttgctgtgtttcccaagtga
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