Suncus etruscus (white-toothed pygmy shrew): 125994851
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Entry
125994851 CDS
T09902
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
125994851
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
90S particles
Other 90S particles
125994851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
OB_RRP5
OB_RRP5_4th
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
Suf
TPR_19
TPR_12
TPR_CcmH_CycH
TPR_2
NRDE-2
TPR_15
ARM_TT21
DUF7017
Motif
Other DBs
NCBI-GeneID:
125994851
NCBI-ProteinID:
XP_049620336
LinkDB
All DBs
Position
17:47288005..47333843
Genome browser
AA seq
1854 aa
AA seq
DB search
MATAEESFPRGGSRKNHKSEKAPQQLVEQDNLFNVSKDEESTKRKKNQKRPTQMKKLKVE
KRENSKLVKEKFELLGFESLCEGMRILGCVKEVRQLELVISLPNGLQGFVQVTEICDAYT
KKLSEQVAQEEPLKDVSGLPELFSPGMLVRCVVSSLSITERGKKTIKLSLNPKKVNEVLS
AEALKPGMLLSGIVSSLEDHGYLVDIGIAGARAFLPLQKVQESTRQKNKGLTGVNLKVGQ
YLNCTIEEVKGNGGVVRLCVGQAEVSAAFATEEQKWTLNNLLPGLVVRAQVQKVTPLGLT
LNFLSLFTGLVDFMHLDPKKAGTYFSNQTVRACILAVHPRTRAVRLSLRPIFLQPGRPLP
RLSCQNLGAVLEDVPVQGFFHKAGATFKLKDGTLAYARLNHLSNSKKDFNPESFKPGNLH
KCRIIDYSQMDELTFLSLRTSVIEAQYLTYHDIKPGALVKGTVLSIKPFGVLVELSRQIK
GLVPSMHLADVQMKNPEKKYQAGKEVKCRVLLCDPEAKKLLLTLKKTLVESKLPAITCYA
DAKPEQQTHGFILRVKDYGCIVKFYNDVQGLVPRHELSAEYIQDPKRLFYPGQVVKVAVL
NCEPAKERMLLSFKMLSDPKKEPTLPGQNKKKSVCVGQLVDVKVLEKTQDGLEVAVLPHN
IRAFLPISHLSDHVSNGPLLHHWLQEGDTLHRVLVLSQTEGHVLLCRKPALVSTVEGGQS
PKSFSEIHVGMLLIGFVKCIKDYGVFVQFPSGLSGLAPKALMSDKFVTTPSDHFVEGQTV
VAKVTNVDEKKQRMLLSLRLSDCTLGDRASTSLLLLSQCLEERQGVRSLMGNRDSVLIQT
LAQMTPGMVLDLKVQEVLEDGSVMFSDGPVPGLVLRASRFHWTGQDLNSGQKKKAVILNV
DMVKLEVHVSLAQDLVHWKAKKLKKGSRHQAVVQYLEETFAVASLADTGQLVAFSLISHL
NDTFHFDSEKLQVGQGVSLTLKTTCPGVTGLLLAIEGPAACRTLRQPRKDSETVEEDEEL
DPALAEGMGKQHTLSIGDVVTGTVKSIKPTHVVVTLEGGIVGCLHASHILDDVPEGTMPT
AKLKVGKTVTARVIGGRDVKTYRFLPISHPGFIQTIPELSIRPSDLKKDNHDALNSHCVS
PLEKIKQYQAGQIVICFLKKLNMVKKWLEVDIMPDIRGRIPLLLASLNFKVLKHPDKKFR
IGEALKATVVGPDSSRAFLCLSLIGPHKLEEGEVAMGRVAKVTPKEGLTISFPFGRMGNV
SIFHVSDAYSETPLEDFTPQQVVRCYVLSTEGPELTLSLRLSRTNPETKSKITDPEINSI
HALQKGQLLRGYVKAVQPEGVLLSLGPSVVGLAQHPHISQHPHASQYSPSNAELYNQYLP
EGKLLTVRILSLNHQKDLVGLSFLPHDTGKPDVFPATPDLPLPKAPETEQKGRDKKQKTR
KRKKLQEQKVQREKKRWCLDPMRQQEVETKQKKASMSEEEDSGVEVYYREGHDEVGERST
LSKEKSARPAEVPRLQLSTGFMWDVGLDSLTPALPPRAESSDSEEDTQSQKTMKKSKKER
VLEKRQAEKDLARLEEALMDPGRQPESADDFDRLVLSSPNSSILWVQYMAFHLQATEIEK
ARAVAERALKTISFREEQEKLNVWVALLNLENMYGSPEALTKVFERAVQYNEPLKVFFHL
ADIYTKSEKFQEAGDLYNRMLKRFRQEKAVWIQYGGFLLRRGQADASHRTMQRALECLPA
KDHVDVIVKFAQLEFQLGDPERAKAMFENTLSMYPKRTDVWSVYIDMTIKHSSQKEVRDI
LERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALEYVEARSSALEN
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcagaagaaagtttcccccgagggggttcgagaaagaaccacaaatcggag
aaagcgcctcaacaattggtggaacaagacaacttatttaatgtttctaaggatgaggag
tccaccaaaaggaaaaagaaccagaaaaggccaacacagatgaagaagctgaaagttgaa
aagagagaaaacagcaagcttgtgaaagagaagtttgaactcctgggttttgagtcactc
tgtgaagggatgcggattttgggttgtgtgaaagaagttagacaattggaactggtgatt
agtctgcccaatggccttcaggggtttgtgcaagtcactgaaatctgcgatgcttatacc
aagaagctgagtgagcaggtggctcaagaagaaccactgaaggatgtgtctggtttgccc
gaactcttctctcctgggatgctggtccgatgtgtggtgagcagtctgagcatcacagag
agaggcaaaaagacgatcaagctatctctgaacccaaaaaaagtcaatgaagtgctcagt
gcggaggctctgaagcctggcatgctgctctcaggtatagtgtccagcttggaagaccat
ggatacctggtggacattggtattgctggagcaagagcttttctgcccctgcagaaagtc
caggaaagtactcggcagaagaacaaaggtctcacaggtgttaatctgaaggtgggtcag
tacctgaactgcaccattgaagaagtgaagggcaatggaggagtcgtccggctctgtgtg
ggccaggctgaggtctctgcagcctttgctactgaggagcaaaaatggacccttaataac
ctgctgccaggactggtggtcagagcacaggtgcagaaggtgactccacttggccttaca
ctaaacttcctctcgttatttactggcctggttgactttatgcatctggatcccaagaaa
gctgggacatacttctcaaatcagacagtaagggcctgtatccttgctgtccaccccagg
accagagctgtgcggctcagcctgcgccccatcttcctgcagcctgggcgcccgctcccc
cggttgtcttgccagaacctgggagctgtgctggaggatgtgcctgtccaaggctttttc
cacaaagctggggccaccttcaagctgaaggatgggaccctggcctatgcccggctgaac
catctctccaattccaagaaagactttaatcctgaatccttcaagccaggaaacctgcat
aaatgtaggatcatcgactatagccaaatggatgagctgacttttctttctctgcggaca
tctgtgattgaggcacagtaccttacatatcatgacatcaaaccaggggcattggtaaag
ggcacagtgctttccataaagccatttggggtgctggtggagttgagcaggcagattaag
ggcctggtgccttccatgcacctggctgatgtccagatgaagaacccagagaagaagtac
caagctggcaaggaagtcaagtgccgggtcttgctttgtgaccctgaagccaagaagctg
ttgttgaccttgaagaaaactctggtggagtccaaactgcctgccatcacctgttatgct
gacgctaagcctgagcaacagacacacggcttcatcctcagggtcaaggattatggctgc
attgtcaaattctacaatgatgtgcagggcttggtgccgaggcacgagctcagtgctgag
tacatacaagaccccaagagactcttctaccctggccaggtggtgaaggtggctgtgctg
aactgtgaacctgccaaagagaggatgctcttatccttcaagatgctgagtgaccccaag
aaagagcccacattacctggtcagaacaaaaagaaatccgtctgcgtaggccagttggtg
gatgtgaaggttctagagaaaacccaagatgggctggaggtggctgtactgcctcacaac
attcgagcttttctccccatctcgcacctctcggaccatgtctccaacggacccttgttg
catcattggctccaggaaggtgacacacttcatagagtcctggttctgagccagacagag
ggacatgtgctcctttgcaggaagccagctttggtctccacagtagaaggtggccagagc
cccaagagcttctcagaaatccacgttggaatgctgctcatcggctttgtgaaatgcatc
aaggactacggggtgttcgtccagttcccttcaggtctcagtggactggctcccaaagct
ctcatgagcgacaaatttgtgaccactccaagtgatcactttgttgaggggcagacggtg
gtcgccaaggtaaccaacgtggatgagaagaagcagcgcatgctattgtcactgcggctg
tcggactgtactctgggggaccgggcctccaccagcctcctcctactcagccagtgtctg
gaggagcgacagggcgtgcgtagcctcatgggcaaccgagattctgtgttgatccagaca
ctggctcagatgaccccagggatggtcctggacctcaaggtgcaggaggtgttagaagac
ggctctgtgatgttcagtgatggcccagtgccgggcctggtgctgagagccagccgattc
cattggacaggacaagatttgaactcagggcagaagaagaaggccgtgatcctcaacgtg
gacatggtgaagctggaagtacatgtgtccctggcacaggatttggtgcattggaaggct
aagaagctgaagaaaggcagcaggcaccaggcagtcgtgcagtacttggaagagaccttt
gctgttgcctccttggcagacaccggccaactggtggccttctccctgatctctcacctc
aacgacaccttccactttgactcagagaagctgcaggtgggacagggggtctccctgact
ctcaagaccacgtgtccaggagtcactggcctcctcttggccatcgaggggccagctgcc
tgtcggaccctgaggcagccccgcaaggactcagagactgtggaggaggatgaagaactg
gacccggctctggctgagggaatgggaaagcagcacactctgtccattggggatgtggtc
acagggactgtcaagtccatcaagcccacccacgtggtggtaaccctggaagggggcatt
gttggctgtctccacgcctcccacattctggacgatgtgcctgaaggcaccatgcctact
gccaagttgaaagtggggaagacagtcactgcgcgagtgattggaggccgagacgtgaag
acctacaggtttctcccaataagccatcctggattcattcagaccatcccagaactgagt
attcgaccaagtgaccttaagaaggacaaccatgatgctctcaacagtcattgtgttagc
cccttggagaagatcaaacagtaccaggcaggtcagatcgtgatctgctttttgaaaaag
ttaaacatggttaagaagtggctggaagtagatattatgccagacatccgggggagaatt
cccttgctgctcgcttctcttaacttcaaggtcctgaaacatccagataagaagttccgg
attggcgaagccctgaaggccactgtggttggccctgactcatccagagccttcttgtgt
ctttctctcataggtcctcacaagctggaggaaggggaagtggccatgggccgggtagca
aaggttacgcccaaggaagggctgaccatctccttcccctttgggaggatgggaaatgtc
agcatcttccatgtgagtgatgcctactctgagacacctctggaagacttcaccccccaa
caggttgtcagatgttacgtcctgtccacagagggccctgaattgacgttgtctctgcga
ttgtccaggacaaacccagagaccaaaagcaaaataacagatcctgagatcaactccatt
catgcccttcagaaagggcagcttctgaggggctatgtgaaggccgtgcagccagagggc
gtactcctgagccttgggccctctgtggttggtttggcgcagcacccacacatctcccag
cacccacatgcctcccagtacagcccgtccaatgcagaactttacaaccaataccttcca
gaagggaagctgcttacggtcaggatcctaagcctgaaccaccagaaggacctagtggga
ctgtccttcctcccccatgacactgggaagcccgacgtgttccctgccaccccagacctg
ccccttcccaaggcaccggagacggagcaaaagggaagagacaagaagcagaaaactcgg
aaacggaaaaagctgcaggagcagaaggtgcagcgggagaagaagcggtggtgcctggac
cccatgaggcagcaggaagtggagacgaagcagaagaaagcctccatgtccgaggaagag
gacagtggggtggaagtttactaccgggagggccacgacgaggtaggcgagaggagcaca
ttgtccaaggagaagtcagccaggcctgcggaggttccccggctgcagctgtctactggc
ttcatgtgggacgtggggctggactcactgaccccagctttgccgccccgagcagagagc
tcagacagtgaggaggacacgcagtcgcagaagaccatgaagaagagcaaaaaggagcgg
gtgctggagaagcggcaggcagagaaggacctggcacgccttgaagaggcgctgatggat
ccgggccggcagcctgagtccgcggacgattttgaccgcctcgtgctcagctccccgaac
agctccatcctgtgggtgcagtacatggccttccacctgcaggccacggagatcgaaaag
gcccgggctgtggccgagagggcactcaagaccatctccttcagggaggagcaggagaag
ctgaatgtgtgggtggctctgctgaacctggagaacatgtatggctccccggaggccctg
acaaaggtgtttgagcgtgctgtgcagtacaacgagcctctcaaggtcttcttccacttg
gccgacatctacaccaagtctgagaaattccaggaagccggtgacctgtacaatcggatg
ctgaagcgtttccggcaggagaaagctgtctggatccagtatggtggcttcctgctgcgg
aggggccaggctgacgccagccatcgcaccatgcagcgggcgctcgagtgcctgcctgcc
aaggaccatgtggatgtgattgtcaagttcgctcagcttgagttccagctgggagatccc
gagcgggccaaggccatgttcgagaacacgctgagcatgtacccaaagcgcacagatgtc
tggtcggtctatattgacatgaccattaagcacagtagccagaaggaagtccgggacatc
cttgagcgggtcattcacctgagcctagcgcccaagagaatgaagttcttcttcaagcgc
tacctggactacgagaagcagcacggcaccgagaaggatgtgcaggctgtgaaggccaag
gcgctagagtatgtggaggccaggagctcagcgctggagaactag
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