Suncus etruscus (white-toothed pygmy shrew): 125994852
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Entry
125994852 CDS
T09902
Symbol
MYOF
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125994852 (MYOF)
Membrane trafficking [BR:
setr04131
]
Endosome - Lysosome transport
Others
Ferlins
125994852 (MYOF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
Dynamitin
Motif
Other DBs
NCBI-GeneID:
125994852
NCBI-ProteinID:
XP_049620337
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All DBs
Position
17:complement(37443982..37626966)
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AA seq
2059 aa
AA seq
DB search
MLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLD
ISSALEIIVKDFETIGQNKLIGTATISLKDLIGDQSRSLPYKQVSLLNERGQEIGATIDL
VIGYEPPSTPHPNDPSGISLSGMGGNEEDEESSEDRLDIPVRGPVPKGPKKMGSEAHLTQ
RLSKSKNRRMLSNKPQDFQIRIRVIEGRQLSGNNIKPVVKVHVCGQTHRTRIKRGNNPFF
DELFFYNVHITPSVLMEEIISIRVYNSHSLRADCLMGEFKIDVGFVYDEPGHAVMRKWLL
LNDPEDANSATKGYLKVSMFVLGTGDEPPAEKQDYDSDSDDVESNLLLPAGIALKWVTFL
LKIYRAEDIPQMDDAFSQTVKEIFGGTADKKNLVDPFVEVSFAGKRVCTNIIEKNANPEW
NQVISLQIKFPSVCEKIKLTIFDWDRLTKNDVVGTTYLHLSKIAASGGEVEDISSSESGA
TAYTANTGETEVGFVPTFGPCYLNLYGSPREYTGFPDPYDELNTGKGEGVAYRGRILVEL
STFLEKTPPDKKLELISNDDLLIVEKYQRRRKYSLSAVFHSATMLQDVGEAIQFEVSIGN
YGNKFDTTCKPLASTTQYSRAIFDGNFYYYLPWSHTKPVVTLTSYWEDISHRLDVVNILL
GIAERLQSNIDAIKSGILGKVPVNLTEIWLKLIDDVIEDTRCPLPPLEGKSNVTILDTQL
LKLRLRALEQIHEAAVRMRSEATDLKSTLVEIEDWLEKLMQLTEEPQNSIPDIIIWMIRG
ERRLAYARIPAHQVLYSTTGEKASGKYCGKTQTIFLKYPQEKNNGPKVPAELRVNIWLGL
STVEKKFNSFAEGTFTVFAEMYENQAIMFGKWGTSGLVGRHKFSDVTGKIKLKKQFFLPP
KGWDWEGEWIVDPERSLLTEADAGHSEFTDEVYQNESRYPGAEWKPAEDTYTDANGDKAA
SPHELTCPPGWEWEDDAWSYDINRAVDEKGWEYGITIPPENKPKSWVAAEKMYHTHRRRR
LVRKRRKDVTQSSASTARAMEEFEDREGWEYASLIGWKFHWKQRSSDTFRRRRWRRKMAP
SETHGAAAIFKLEGALGADLTEDGDEKSSEKGKQSATTVFGANTPIVSCNFDRVYTYHLR
CYIYQARNLMALDKDSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTIIFDEIEIYGDPQ
TVLQNPPKVVIELFDNDQVGKDEYLGRSMCSPLVKLNSEMDITPKLLWYPVMNGDKACGD
VLVTAELILRNKDGSNLPITPSQRAPNLYMVPQGIRPVVQLTAIEILAWGLRNMKSFQMA
SITSPSLIVECGGERVESVVIKNLKKTPNFPSSVLFMKVLLPKEELYMPPLVIKVIDHRQ
FGRKPVVGQCTIEHLDRFRCDPYAGKEDIVPRLKASLMSTLPSRDIIIEIEDTKPLLTSK
LMEKEEEVMDWWSKFYASIGDHEKCGQYLQKGYSKLKVYDCELEDVAEFEGLTDFSDTFK
LYRGKAEDNDDPSVVGEFKGSFRIYPLSDDPTVPAPPRQFRELPDSIPQECTVRIYIVRG
LALQPQDNNGLCDPYIKITLGKKVIEDRDNYVPNTLNPVFGRMYELTCYLPQEKDLKISV
YDYDTFTRDEKVGETTIDLENRFLSRFGSHCGIPEQYCVSGINTWRDQSRPTQLLQNVAR
YKGFPPPILSEDGCQIRYGGREYSLDEFEANKILHQHLGPPDERLALHILRTQGLVPEHV
ETRVLHSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNITPRKAKKYYLRVIIWNTKDVIL
DEKSITGEEMSDIYVKGWIPGNEENKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEQLCI
VAKKEHFWSIDQTEFRVPPRLIIQIWDNDKFSLDDYLGFLELDLHHTIIPAKSSEKCNLD
MIPDLKSMNPLKVKTASLFEQKSMKGWWPCYADKDGTRVMAGKVEMTLEVLNEKEADERP
AGKGRDEPNMNPKLDPPNRPETSFLWFTNPCKTMRFIVWRRFKWIIIGLLILLILLLFVA
VLLYSLPNYLSMKIVRPNA
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtgtgattgtggaatctgccagcaatatccctaagacgaaatttgggaaacca
gatccaattgtgtctgttattttcaaggatgagaaaaagaaaacaaagaaggtggataat
gaactcaatcctgtctggaatgagattctggaatttgacctgagaggtataccattggat
atttcatctgccctggagataattgtgaaagattttgagacaattgggcaaaataaacta
attggtacagctaccatatccctaaaggacctgattggtgaccaaagcagatctttgccc
tacaaacaagtgtctctactaaatgaaagaggacaagaaattggggccaccattgacttg
gtaatcggctatgaaccaccttcaactccacatccaaatgatcccagtgggattagcttg
tctggtatgggaggaaatgaggaggatgaggaaagcagtgaggacaggttggacatccct
gtcagaggccctgtgcccaagggtccaaagaagatgggttctgaagctcatcttacccag
aggctctcaaaaagcaagaatcggcggatgctgtccaacaagccacaggacttccagatt
cgtatccgagtgattgagggccggcagttaagtggcaacaatataaagcccgtggtcaaa
gttcacgtctgtggacaaacccaccgcacaaggatcaagagaggaaacaatccctttttc
gatgagttatttttctacaacgtccacatcaccccctctgtgttgatggaagagatcatt
agcattcgggtttataattcccattccttaagggcagactgtctgatgggggaatttaag
attgatgttggatttgtttatgatgaacctggtcatgctgtcatgagaaaatggcttctt
ctcaatgaccctgaagatgctaactcagccactaaaggatacctgaaagtcagcatgttc
gttctgggaactggtgatgagcctcctgcagagaaacaagactatgacagtgacagtgat
gatgtggagagtaatctgctgcttcctgctggcattgccctcaaatgggtgacattcctg
ctgaaaatctaccgagcagaggacattccccagatggacgatgccttctctcagacggta
aaggaaatatttggaggtactgcagataagaaaaacctggtggatccttttgtagaagtt
tcttttgctggaaaaagggtttgcacaaatataattgagaaaaatgcaaaccctgagtgg
aatcaagtcattagtcttcagatcaagtttccttcagtgtgtgagaaaataaaactaaca
atatttgactgggatcgccttaccaaaaatgatgttgttggaacaacatacctgcatctc
tctaaaattgccgcctctggtggggaagtggaagatatctcatcttcggaatctggggct
acagcatatacagcaaatacaggcgaaacagaggtgggctttgttccaacatttggacct
tgttatctgaacctttatggaagtcccagagagtacacaggattcccagatccctacgat
gagctaaatactggaaagggggaaggtgttgcctatagaggcaggattttagttgaacta
agcacttttcttgagaagacaccaccagataaaaagcttgaactcatttcaaatgatgac
ctactgatagttgagaaatatcagcgaagacggaagtacagcctgtctgcagtgttccat
tcagccaccatgttacaagatgttggtgaagccattcagtttgaagtcagcattgggaac
tatggtaacaagtttgacacaacctgtaagcctttggcatcaaccactcaatacagccgg
gccatatttgatggaaacttctattattacttgccttggtctcacacaaaacctgttgtt
accctgacttcatactgggaggatatcagtcatcgcctggatgtagtgaacattcttcta
ggtatagcagaaagactgcaatcaaacattgatgctataaaatcagggattctaggaaaa
gttcctgtaaacttgactgaaatatggctaaagctgattgatgatgttatagaagacaca
agatgcccactacctccgctggaaggaaaatctaatgtcacaattcttgatactcagtta
ctcaagttgcgcttgagagctctagagcaaatacatgaagcagcagtgagaatgagatct
gaagccacagacttgaaatccacattggtagagatcgaagactggcttgaaaaattaatg
caactgacagaagagccacagaacagtatacctgacattattatatggatgatccgaggt
gaaagaagactggcctatgcacgaattcctgcacatcaggttttatattccacaactggt
gagaaagcatcaggaaagtactgtgggaagacacagaccatctttttgaagtatcctcag
gaaaaaaacaatggaccaaaggtgcctgcagagttgcgagtgaacatctggctgggttta
agtactgtggagaagaaattcaacagctttgcagaaggcacattcactgtttttgctgaa
atgtacgaaaatcaagctattatgtttggaaagtggggcacatctggattagtaggtcgt
cacaaattctctgatgtcacaggaaaaataaagctcaagaaacaattctttttgcctccc
aaaggttgggattgggaaggagagtggatagttgatcctgaaagaagtttgctgactgag
gcagatgcgggtcactcggagttcacggatgaagtgtatcagaatgagagtcgctatccg
ggagctgagtggaagccagctgaggacacctacacagatgcgaacggagataaagcagca
tcaccccatgagctcacttgccctccaggttgggaatgggaagacgatgcgtggtcatat
gacataaatcgtgcagtggatgagaaaggctgggaatatggaattaccattcctcctgaa
aataagcccaaatcctgggttgcagcagagaaaatgtatcatactcacagacggcggagg
cttgtccgcaaacgcaggaaagatgtaacacaatcctctgcaagtactgcaagggctatg
gaagaatttgaagaccgagaaggatgggaatatgcttcattaattggctggaaatttcac
tggaaacagcggagttcagatacctttcgccgtaggcgctggagaagaaaaatggctcct
tcagaaacacatggtgcagctgccatctttaaactcgaaggtgcccttggtgcagatctg
actgaggatggagatgagaagagttcagagaaagggaagcagagtgccaccactgtgttt
ggagcaaacactcccattgtttcctgtaactttgacagagtctacacttaccatctgcgc
tgctacatctatcaagccagaaacctcatggctttagataaagatagcttttcagatcca
tatgcccatgtctccttcctccatcgaagcaaaacgactgaaatcatccactcgactctg
aatcctacatgggaccaaacgattatatttgatgaaattgaaatttatggggacccccaa
acagtcctgcagaacccaccaaaagttgtcattgaactttttgacaatgaccaagtgggc
aaagatgaatatttagggcgaagcatgtgctctcctctggtgaaactaaactcagaaatg
gacatcacacccaaacttctctggtacccagtaatgaatggagacaaggcttgtggggat
gtgctagtaactgcagagttgattttgaggaacaaggatggctccaaccttcctattact
ccttcacaaagggcaccaaatctatacatggtcccccaggggatcaggcctgtggttcag
ctcactgctattgagattctagcttggggtttgagaaacatgaaaagcttccagatggct
tctattacatcacccagtctcattgtggagtgtggaggagaaagggtggaatcagtggtg
atcaaaaacttgaagaagacacccaactttccaagttctgttctcttcatgaaagtgctt
ttgcccaaagaggagctgtacatgccaccattggtgatcaaggtcattgaccaccgacag
tttggaaggaagccggttgtcggccaatgcaccattgagcacctggaccgcttccgctgt
gacccatatgcaggaaaagaggacattgtgccacggctgaaagcctctcttatgtctact
ctaccctcccgggacatcattattgaaatagaagacaccaaaccattactgacatccaag
ctaatggaaaaggaggaagaagttatggactggtggagtaaattttatgcttccataggg
gatcatgaaaaatgtggacaatatttacagaagggctattccaaactcaaggtatatgat
tgtgaacttgaagatgtagcagaatttgagggcctgacagacttctcggatactttcaag
ttatatcgaggcaaagcagaggacaatgacgatccttctgtagtaggagaatttaaaggc
tcctttagaatctacccactgtcggatgaccccactgtgccagcccctcccaggcagttt
cgggaattacctgacagcatcccacaggaatgcacagttaggatttacattgttcgaggc
ttagcactccagccccaggacaacaatggcctgtgtgacccttatataaaaataaccctg
gggaaaaaagtcattgaagatcgggacaactacgtccccaacactctcaacccagttttc
ggaagaatgtatgaactgacctgctacttacctcaagaaaaagacctgaaaatttctgtc
tatgattatgataccttcacccgagatgaaaaagtgggagaaacaactatcgatctggaa
aaccgtttcctttctcgctttgggtcccactgtggcatacctgagcaatattgtgtttct
ggaataaatacctggcgagatcagtcgagacccacgcagttgctacaaaatgtagctaga
tataaaggcttcccaccgcccatcctgagtgaagatggatgtcaaatcagatacggggga
cgagaatacagtttggatgaatttgaagccaacaaaattctgcaccagcacctgggaccc
cctgatgagcgtcttgcccttcatatcctcaggactcagggcctggttcctgaacatgtg
gaaacacgagttttacacagtacttttcagcccaacatctctcagggaaaacttcagatg
tgggtggatgttttccccaagagtttaggaccaccaggccctcccttcaacatcacacct
cgtaaagccaagaaatactatctgcgtgtgatcatctggaacaccaaagatgttatcttg
gacgagaaaagtattacaggagaggaaatgagtgacatttatgtcaaaggctggattcct
ggtaatgaagaaaacaaacagaaaacagatgtccattacaggtccttggatggtgaaggg
aattttaactggagatttgttttcccatttgactacctcccagcagaacaactttgtatc
gttgccaaaaaagaacatttctggagtattgaccaaactgaattccgtgtcccgcccaga
ctaatcattcagatatgggacaatgacaagttttctctggatgactacttgggttttctg
gagcttgatttacatcacaccattattccagcaaaatcatcagagaaatgcaatttggat
atgattccagatctcaagtccatgaaccccctcaaagttaaaactgcctccctctttgag
cagaagtctatgaaaggatggtggccatgctacgcagataaagatggcacccgtgttatg
gctgggaaagtggagatgacgttggaagtcctcaatgagaaggaggctgatgagaggcca
gctggaaagggacgggatgaacctaacatgaaccctaagctggacccgccaaaccgccca
gaaacttccttcctctggttcaccaacccatgtaagacaatgaggtttatcgtgtggcgt
cgttttaagtggatcatcatcggtctgctgatcctgctgattctgctgctctttgtggct
gttctcctatactccttgccgaattatttgtcaatgaagattgtgagaccaaatgcataa
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integrated database retrieval system
