Suncus etruscus (white-toothed pygmy shrew): 125994856
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Entry
125994856 CDS
T09902
Symbol
SEC31B
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31B
KO
K14005
protein transport protein SEC31
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125994856 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125994856 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
setr02044
]
125994856 (SEC31B)
Membrane trafficking [BR:
setr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125994856 (SEC31B)
Secretion system [BR:
setr02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
125994856 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
TPR_Sec16
WD40_RFWD3
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_SPT8
MIOS_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
125994856
NCBI-ProteinID:
XP_049620340
LinkDB
All DBs
Position
17:complement(44140008..44172301)
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AA seq
1173 aa
AA seq
DB search
MTMKLKELKQPAVQAWSPASQYPAYLATGTSAQQLDASFSTNGTLEIFEVDFRDPSLDLK
CKGVLSVSSRFHKLIWGSFGNGLLEGSGAIAGGGDNGTITVYSVTHILSTGKEPVIAQTQ
KHTGAVRALDFNPFQANLLASGASDSEIFIWDLNNLSTPMTPGSKSQQPPEDIKALSWNR
QVQHILSSAHPSGKAVVWDLRKNEPIIQVSAHSSRMHCSGLAWHPDIATQLVLCSEEDAL
PVIQLWDLRFASSPMKVLESHSRGILSVSWNQADAELLLSSAKDSQILCWDLGSGDVVCQ
LPTPSSWCFDVQWCPRDPSVFSGTSFDGWITLYSVMGRSWEVQQMRQADKISWSFSKGXS
LPPLQVPEQLAQASLIPPLKKPPKWMRRPAGVSFAFGGKLVTFGLPNNSGPQRRQPCPRL
VFISQVTTETEFLQRAAELRQALGAETLSSFCQNKIQQAPGHSEKLLWQFLKVALEKDSR
VKFLKLLGHSKEELQDKVAMWLKKDLQPEESTAPKGDTPTITEQRLFCSQTPRQTSEKAT
ASSAFFDELLPQNLGPWEIPVTEDADGLLSRALLLGELEAAVELCLQEENFTEAILLAQV
GGADLLKRTQKRYLAKRKSKISPLLACVVQKNWEALVGACSLKNWREALAMLLTYSVPER
LPELCDMLGTRLEQEGNGALAAEARLCYVCSGNVERLVECWAKGHQAPSPMALQDLMEKV
MVLHRRLELLWGPEQVSLGPAATSRIIQYASFLAGQGSLAAALSYLPRDCAQPPALQLKD
RLFHAQGSDVLGQQASPFPFPRVVVGTPPHPKNTASYTSGFQLSHQVPAPPPHPRILTPQ
PPLVMPFMHSSPNPYQDPRMQNISVYRTPGPQAPQSLPLGPGVMPALPQPQPFEGQRAQA
PHPVGVTGKWPPLVTPPDLQQPGSASFSETPLLFSPLSVRPVGLNPVGSQPFTPPASFPG
PHTPGGPTTPCLSILPKVGISAPPPGPSDSLKNVPVAKGSLQRKQLPETFVPPAPITAPV
LSLLPEPHGGLSLQPLIPGVGHPSSGTPRERSLKQRAPEKKEKKQLPPEHQSLRTSFEAL
LQRCSSATDLKTKRKLEEATCRLEGLYEQICEGTLSPQVLAGLHEVARCVDAGNFEQGLA
VHMQVAGSSNFSEVSGFMPVLKAVLTIAHKLSL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaagctgaaggaactgaagcagccggctgtccaagcatggagcccagccagc
caatatcctgcgtatctggccacaggaacatctgcccagcagctagatgcctcctttagc
acaaatggcaccttggagatctttgaagttgatttcagggacccttctttggacttgaaa
tgcaagggagtcctttctgtctccagcaggtttcacaagctgatctgggggagctttggc
aatgggcttctagaaggctccggggctattgcaggcggtggggacaatggaacgattaca
gtatacagcgtgacccacatcctgtctactgggaaggaacctgtgattgcccaaactcag
aagcacacgggggctgtcagagccctcgactttaaccctttccaggccaacctcctggcc
tcaggggccagcgattctgaaatcttcatttgggatttgaataatctgagcacgccaatg
acccctggatcaaagtcacagcagcctccagaagacatcaaggccctttcttggaaccgg
caagtgcagcacattctgtcttcagctcaccccagtggcaaggcagtggtgtgggacctc
aggaagaacgaacctatcatccaagttagcgcccacagcagcaggatgcactgctcaggc
ctggcctggcacccggacatcgccacccagttggtgctgtgctcggaagaagatgcactc
cctgtgatccagctgtgggacctgcgctttgcctcttccccgatgaaggttttggagagc
cacagcagggggatcttgtctgtgtcatggaatcaggctgatgccgagctgctgctgagt
agtgccaaggacagccagatcctgtgctgggacctggggagtggtgatgtggtttgtcag
ctgcccaccccaagcagctggtgctttgacgtgcagtggtgccctcgggacccttcagtg
ttctctggtacctccttcgatggctggatcactctctactctgtgatgggtaggagctgg
gaagttcagcagatgagacaagcagacaagatctcctggtccttcagcaaaggctagtct
cttcccccactgcaggtgccagagcagctggcccaggcctcactgatccctcccctgaag
aaaccacccaagtggatgagaagaccagcaggggtctcatttgcttttggagggaagctg
gttacttttggccttcctaacaactctggtcctcagagaaggcagccttgcccccgcctc
gtcttcatcagccaagtcaccactgagacagagtttctacagcgagcagcggagctgcgc
caggcgctgggggccgagaccctctcgagtttctgtcagaacaagatccagcaggctcca
gggcatagtgagaagctgctctggcagtttctgaaggtggccttagagaaagactccaga
gtgaaattcttaaagctcttaggacacagtaaggaggagctgcaggacaaggtggccatg
tggctgaagaaggacttgcagcctgaagagagcactgcacccaagggggacacacccacg
atcaccgagcaacgactcttctgcagccagacccccagacagacttctgagaaagccact
gcctcctccgccttctttgatgagctgctcccccagaatctgggtccctgggagatccca
gtcactgaagatgctgacgggcttttgagccgggcgctcctgctgggagagctggaagca
gctgtggagctgtgtctgcaggaagagaacttcacagaggccatcctgctggcccaggtt
gggggtgcagacctcttaaagcgaacccagaagcgctacttggccaagaggaaatcaaaa
atctccccgcttctagcctgtgtcgtgcaaaagaactgggaggccttggtgggtgcctgc
agcctgaagaattggagggaggcgctggccatgcttctgacttactcagtgccagagaga
ctccctgaactctgtgacatgctgggcactcgcctggagcaggagggaaacggggcactg
gctgctgaagccaggctctgttacgtgtgctccgggaacgtggaacggctggtggagtgc
tgggcaaaaggccaccaggctccatcccccatggctctccaggacctgatggagaaggtg
atggtccttcacaggagactcgagctactgtggggaccagaacaagtgagcctgggccct
gctgcaacctccaggatcatccagtatgccagctttctggcaggccaaggcagcttggct
gctgccctaagctatctccccagagactgtgctcagccacctgccttgcagctgaaagat
cggctgtttcatgcccagggttctgatgttttgggccaacaggcttcccctttccccttc
ccccgagttgttgtgggaactccccctcaccctaaaaatacagcatcttacacatcgggc
ttccagctttctcaccaggttccagccccacctcctcacccaaggattctcacacctcag
ccaccactagtgatgccttttatgcactccagtcccaacccttaccaggaccctagaatg
cagaatataagtgtctacagaaccccggggccccaggcacctcagtctttgcccctgggc
cctggagtaatgcctgctttacctcagccgcagcctttcgagggacaaagggcacaggct
cctcaccccgtgggtgtcactggcaagtggcctccattggtgacccccccagacctccag
cagcctggctccgcctccttctcagagactcccttgctgttctcgccgctttctgtgagg
ccagtgggtctcaaccctgttggttcccagcccttcacccctcctgccagcttccctggg
ccacatacccccggaggccccactactccctgcctcagcatcctccccaaggttggcatt
tctgctcctccaccaggaccttcagattccttgaaaaatgttccagttgccaagggaagc
cttcagaggaagcagttgccagagacgtttgtgcccccagcaccaattactgctccggtt
ctgagccttctccctgagccacacgggggcctttccttacagccactcatcccaggtgtg
ggtcacccttcctcaggcacacccagagaacgcagcctaaagcaacgagcacctgagaag
aaggaaaagaagcagctgccccctgagcatcagtctttgaggaccagctttgaggctctt
ctgcagcgctgctcatctgccacagacttaaaaacaaagcggaagttggaggaggccacc
tgcaggctggaaggtctctatgagcagatctgtgaggggacactctcgcctcaggtactg
gctgggctccacgaggtggcccgctgtgtggatgctggaaacttcgagcagggccttgcc
gtgcacatgcaggtggcgggcagtagcaacttcagcgaggtgtccggcttcatgcccgtc
ctgaaggctgttctcaccattgcacacaagctgagcctctga
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integrated database retrieval system
