Suncus etruscus (white-toothed pygmy shrew): 125994960
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Entry
125994960 CDS
T09902
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125994960 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125994960 (VTI1A)
Membrane trafficking [BR:
setr04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
125994960 (VTI1A)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Laminin_II
DUF6987
Sec20
Mer2
LMBR1
Sec8_N
DUF1664
Peptidase_S46
BPS1
DUF5344
HAAS
FapA
Motif
Other DBs
NCBI-GeneID:
125994960
NCBI-ProteinID:
XP_049620487
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Position
17:58789094..59238457
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AA seq
217 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKITRVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQRAHLLD
NTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLGKSSRV
LTGMLRRIIQNRILLVILGTILVITILTAITLSLRSH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacttcgaaggctacgagcaagacttcgcggtgctgaccgccgagataacc
agcaagatcactagggtcccccgactcccgccggatgagaagaagcagatggtcgcaaat
gtggagaaacagctggaagaagcgaaagaattgcttgaacagatggatttggaagtccga
gagataccaccccaaagtcgaggcatgtatagcaacaggatgagaagctacaagcaagaa
atgggaaagcttgaaacagattttaaaaggtcacggatcgcctacagtgacgaagtccgg
aatgagctcctaggggatgacgggaattcctccgagaaccagagggcacatctgctcgat
aacacagagaggctggaaaggtcatcgcggagactagaggctggataccaaatagcagtg
gaaaccgaacaaattggccaggagatgctggaaaatctcagtcatgacagagaaaagata
caacgggcacgtgaaagactgcgggaaacagatgctaacttggggaaaagctcccgagtc
ctgacagggatgttgcgaagaatcatccagaatcgcatcctgcttgtcatcttgggtacc
attctggtcatcaccattttgacggccatcactctttctctccgaagtcactga
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