Suncus etruscus (white-toothed pygmy shrew): 125995055
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Entry
125995055 CDS
T09902
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
125995055
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125995055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
NBCH_WD40
HIRA_B
WDR90_beta-prop_4th
Mcl1_mid
WD40_like
CAAP1
Motif
Other DBs
NCBI-GeneID:
125995055
NCBI-ProteinID:
XP_049620548
LinkDB
All DBs
Position
17:21209591..21298504
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AA seq
1016 aa
AA seq
DB search
MKLLKPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIP
KMLCQMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQ
WRCVSILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGL
TWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSA
HAMNNSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSAKPSCPYCCC
AVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQD
ELGDPLSEEEKSRIHQSTYGKSLAIMTEAQLSTAVIENPEMLKYQRRQQQQLDQKSATSK
ETGSSASVAGVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSTAFFNS
IPLSGSLAGSMLSSHSNQQLLTLDSNTHNSFGASKPSTEPVASASTRLVGDSVSKDSMNA
TSTPAVSSPSVLTTPSKIEPMKAFDSRFTERSKTTPGAPALSSVAPAAVERLKEQNLVKE
LRPRDLLESSSDSDEKVHVTKSSSLSKRKLELEVETVEKKKKGRPRKDSRLMPVSLSVQS
PATLTAEKDSICLSVPAPALKLPMPGPQKAFTLQVSSDPSMYIEVENEVTTVGGVKLSRL
KCNREGKEWETVLTSRILTAAGSCDVVCVACEKRMLSVFSTCGRRLLPPILLPSPISTLH
CTGPYVMALTAAATLSVWDVHRQVVVVKEESLHSILAGSDMTVSQILLTQHGIPVMNLSD
GKAYCFNPSLSTWNLVSDKQDSLAQCADFRSSLPPQDAMLCSGPLAIVQGHASTSGRQAA
RLFSVPHVVQQETTLAYLENQVAAALTLQSSHEYRHWLLLYARYLVNEGFEYRLREICKD
LLGPVHYSTGSQWESTVVGLRKRELLKELLPVIGQNIRFQRLFTECQEQLDILRDK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgaagcccacctgggtcaaccacaatggcaagccaattttttctgttgat
attcaccctgacgggaccaagttcgcaactggaggacaaggacaggattctgggaaggtt
gtgatctggaatatgtctccagtcctccaagaggatgacgagaaggatgaaaatattccc
aagatgctttgccagatggacaatcatttagcatgtgtgaactgtgtgcggtggtcaaac
agtgggatgtatttagcttctgggggagatgacaaactgattatggtgtggaagcgggct
acgtacattggccccagcaccgtatttggctccagtggtaagcttgccaatgtggagcag
tggcgatgcgtttccatccttcggagtcactcaggcgatgtgatggatgtagcatggtct
ccccatgatgcctggttggcttcatgcagcgttgataacactgttgtcatctggaatgct
gtgaagttcccagaaattctagctacattgagaggtcattctggcttggttaaagggttg
acttgggaccctgttggtaaatacattgcctctcaagctgatgaccgcagcctgaaggta
tggaggacactagactggcaattggagaccagcatcaccaaaccttttgatgagtgtgga
ggaacgacccatgtgttgcggcttagctggtcacctgatggacactatctggtatctgcc
catgccatgaataattctggccccactgcacagattattgaacgggaaggctggaagacc
aacatggattttgttgggcaccggaaagctgtgactgttgtgaaatttaacccaaaaatc
ttcaaaaagaagcaaaagaatgggagttctgcaaagcctagctgtccatactgttgctgt
gctgttggcagcaaggaccgttctctctctgtctggctcacatgtttaaaacgacctttg
gttgtcatccatgaactgtttgacaaatccattatggatatttcctggactctgaacggg
ttgggcatcctggtgtgctcgatggatgggtctgtggcattcctagatttctcccaggat
gaacttggagatccactgagtgaagaggaaaagagccgcattcaccaatccacctatggc
aagagtttggccatcatgaccgaagcccaactctccacagctgtcatcgagaaccctgag
atgctcaaataccagcggaggcagcagcagcagctggaccagaagagtgccacttccaaa
gagacaggctcatctgcctcggtggctggcgtggtcaatggtgaaagtcttgaagacatc
aggaagaatcttttaaagaaacaagttgaaacccgaacagcagatggacggagaagaatc
acgcctctttgcatagcacagttggacactggggacttctccacagcgttctttaacagc
atcccactctcgggctccctggcgggcagcatgctttcctctcacagcaatcagcagcta
ctaactttggactccaatacccacaactcgtttggtgcttcaaagccttccacagaacct
gtggcatcagccagcaccagacttgtgggagattctgtcagtaaagacagcatgaatgct
acctcgactcctgctgtatcatccccttctgtgttaacaaccccatcaaagattgagcct
atgaaagcatttgactcccgattcactgaacggtctaaaacgacaccaggtgctcctgcc
ttgtccagtgtggctccagcagctgtagaaaggttgaaagaacagaatcttgtgaaagaa
ctgcgaccccgggacctactggagagcagcagtgacagtgatgagaaggtccatgtgacc
aaatcctcctcactgtctaagcgaaaacttgagcttgaggtggagacagtagaaaagaag
aagaaagggcggccaaggaaagactcacgactcatgccggtgtctctctctgtccagtcc
ccagcaaccctgaccgcagaaaaggattctatatgtttgtctgtaccagcacctgcactg
aagctgcccatgccgggtccccagaaagcatttaccctccaggtgagctctgatccctcc
atgtacattgaggtggagaatgaagtgacaactgtggggggtgtgaagctgagtcgcttg
aaatgtaatcgggaagggaaagagtgggagacggtactcaccagcagaatcctgactgca
gctggtagctgtgatgtggtgtgtgtcgcctgtgaaaagaggatgctgtcagtgttctcc
acctgtggtcgccgccttctccctcccattctcctgccatccccgatctccactttgcac
tgcactggcccctatgtcatggcactcactgctgcagccacactttctgtctgggatgtt
cacagacaagtggttgtggtgaaagaagaatctctacactccatcttagcaggaagtgat
atgacagtgtcacagatcttgctgacacaacatggaattccagtgatgaacttgtctgat
gggaaagcatattgcttcaatccgtcactttctacatggaacctggtttctgacaagcaa
gactccctggctcagtgtgcagactttaggagcagcctgcctcctcaggatgccatgttg
tgttcgggacccttagccatagtccaaggccacgcctccacttcaggaaggcaggcggct
cgtctcttttccgtgcctcatgtggtgcaacaggagactactctggcttacctggagaac
caggttgcagcagctctcactctgcagtccagccatgaataccgccattggctccttctc
tacgcgcggtacctagtgaatgaagggtttgaatatcgactacgagaaatatgcaaggac
ttactgggtccggttcactactccactggaagccagtgggagtcaacagtagtgggtctg
cggaagagagaattgttgaaggaactgctgccagtcatcgggcaaaacatccgcttccag
cgtctcttcaccgaatgtcaggaacagctcgatatcctaagggacaagtag
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