Suncus etruscus (white-toothed pygmy shrew): 125995058
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Entry
125995058 CDS
T09902
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00600
Sphingolipid metabolism
setr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125995058 (SMPD4)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
125995058 (SMPD4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
125995058
NCBI-ProteinID:
XP_049620556
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Position
17:complement(21787586..21810912)
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AA seq
868 aa
AA seq
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MTSFRRQVVEWRLPSLQRTTALWIRQWFPKAANFDSPRANTMAFPHLQQPSFLLATLKAD
SINKPFAQRCQDLAKIIEDFPAKELHTIFPWLVESIFGSLDGLLVGWNLRCLQSRVSPVE
FSIVMEFLDPGGPMMKLVYKLQAEDYKFEFPISYLPGPVKACIQERVLPDSPLYHNKIQF
PPTGGPSLNLTLNSFEYYLFFFAASLITQKPLPGTLHVRTSDCAYFILVDRYLAWFLPTE
GSVPPPFSSSPGGPTPSPAPRTPTMPFASYGLHHTSLLKRHISHQTSVNADPASHEIWRS
ETLLQVFVEMWLHHYSLEMYQKLQSPHAKLEVLHYRLSVSSALHSPAQPSLQALHAYQES
FSPTEEHVLVVRLLLKHLHAFSTSLKPEQLSPSTHSHATSPLEEFKRAAIPRFVQQKLYL
FLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKQAQSSDIQPRSVSERWSPFVQENLL
MYTKLFVGFLGRALRTDLVSPKNALMVFRVAKVFAQPNLAEMIQKGEQLFLEPELVIPHR
QHRFFTTPTFTGSFLSSWPPAVTDISFKVKNHVYSLEGQDCKYTPMFGPEVRMLVLRLAQ
LITRAKQTAKSISDQCGESTSSHPFLAWLGFCSSDTNGCSPANDLDEMGQDSIRKTDEYL
EKALEYLCQMFRLSEAQLAQLTLALGTAQDENGKKQLPDCIVGEDGLILTPLGRYQIING
LRRFDIEYQGDSELQPIRSYEIAGLVRVLFRLSSVINQKFAGQMAALCSRADFLGSFCRY
HLMEPGLADKHLLSPVGRAGMASRVRGPRLSLRFLGSYRTLLSLLLTFFVASLFCVGPLP
CTLFLVLGYLLYAMAMTLLTERGKLHQL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcattcaggcgccaagtagttgaatggcggctcccgtctctgcagcgaaccacc
gcgctatggatccggcagtggtttcctaaggcagccaattttgactctccacgggccaac
accatggcatttcctcatctgcagcagcccagcttcctactggctaccctgaaagctgac
tctatcaataagccttttgcacagcggtgccaagacttggctaaaatcattgaggatttt
ccagcaaaggagctacacaccatcttcccctggctggtagagagcatttttggcagcttg
gatggtctccttgtcggctggaatcttcgctgcctccagagtcgtgtgagcccagtggag
ttcagcatcgtgatggaatttctggacccaggtggcccaatgatgaaactggtgtataag
cttcaagctgaagactacaagtttgagtttcccatctcctacttgcctggccctgtgaag
gcatgcatccaggagcgggttcttcctgacagccccctgtaccacaacaagatccagttt
ccccccaccggcgggccaagcctgaacttaaccctcaattcgttcgagtattacttattc
ttctttgctgcgagcctcatcactcagaagccactccctgggacccttcacgtccgtact
tcagactgtgcctatttcatcctagtagataggtacctggcatggttcctgcccacagaa
ggcagcgtgcccccgccattctcctccagcccaggggggcctactccatccccagctccc
aggacaccaacaatgccttttgcttcctatggcctccaccacaccagcctcctgaagcga
cacatctctcatcagacatcagtgaatgcagaccctgcctcccacgagatctggaggtcg
gaaacgctgctccaggtctttgttgaaatgtggcttcaccattattccttggagatgtac
caaaagctgcagtcccctcatgccaagctggaggttctgcactaccgactcagtgtctcc
agcgccctccacagccctgcccaacccagtctccaggccctccacgcctaccaagagtcc
ttctcccccactgaggagcatgtgctggtggtacgcctgctgctcaagcacctgcacgcc
ttctccaccagcctgaagcctgagcagctctcgccctccacacactcgcacgccaccagc
cccttggaggagttcaagagggctgctatccccaggtttgtccagcagaagctctacctc
tttcttcagcactgctttggtcactggccccttgatgcgtccttccgagccgtgctggag
atgtggctgagctacctacagccgtggcggtatgcccctgagaagcaggctcagagcagc
gacatccagccccggagtgtgtccgagagatggtcaccttttgtgcaggagaatctgctc
atgtacaccaaactcttcgtgggcttcctgggtcgtgccctccgcactgacttggtcagc
cccaagaacgcgctcatggtgttccgcgtagccaaagtctttgcacagcccaacctggcc
gagatgattcagaaaggtgagcagctgttcctggagcctgagctcgtcatcccccaccgc
cagcaccggttcttcactacgcctacatttaccggaagtttcctttcgtcgtggccacca
gctgtcactgacatctccttcaaagtgaaaaaccatgtctatagcctggagggccaggac
tgcaaatataccccaatgttcgggcccgaagtccggatgttggtcttgcgcctggctcag
ctcatcacgagggccaagcaaacagccaagtccatctctgaccagtgtggcgagtccacc
agcagccaccccttcctggcctggctgggtttctgctccagtgacaccaacggctgtagt
cccgccaatgacttagacgagatgggacaggacagcatccgcaagacggatgagtacctg
gagaaggccctggagtacctgtgccagatgttccgactcagtgaggctcagctggcccag
cttacactcgccctggggacggctcaggatgagaatgggaagaagcagctcccggactgt
attgtgggtgaggatggactcatcctcacgcccctgggtcgttaccagatcataaatggg
ctgcgccggtttgacatcgagtaccagggagactcggaactgcagcccatccggagctat
gagatcgcggggctggtccgtgtgctcttccgtctgtcctctgtcatcaaccaaaagttt
gcaggtcagatggcagccctgtgctcgagagcagatttcctcggtagcttctgccgctac
cacctgatggagcctggactggctgacaagcacctgctgagccctgtgggcagggctggg
atggccagccgcgtccgtggcccccgactgagcctgcgcttcctgggcagctaccgcaca
ctcttgtccctgttgttgaccttcttcgtggcctctctgttctgtgttgggcccctgccc
tgcaccctgttccttgtgctggggtaccttctctatgctatggccatgaccctgctgact
gagcgaggcaagctgcaccagctctga
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