Suncus etruscus (white-toothed pygmy shrew): 125995064
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Entry
125995064 CDS
T09902
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125995064 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
125995064 (CSTF2T)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125995064 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
125995064 (CSTF2T)
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Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125995064
NCBI-ProteinID:
XP_049620564
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Position
17:15552093..15554269
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AA seq
644 aa
AA seq
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MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPVIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKVHVAPLIPGKNQPVSGPGPGPGPGPGPGPGPGPSPGLCQAPGVLLS
QPNPSAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPMPAAVPGPGPGPGPGALTPGGAM
QPQVGMPGVVGPVPLERGQVQVQVQMADPRAPMPRGPMAAGGLPPRGLLGDAPNDPRGGT
LLSVTGEVEPRGYLGPPHQGPPMHHASGHDGRGPSAHEMRGGPMADPRLLIGEPRGPMLD
QRGLPMDGRGGRDARGLEARALETEVLESRVMERRGMETCALENRAMEARAMEARAMEAR
GMEIRGPVPTSRGPMTGGIQGPGPISMGAGGPQGPRQVPNIAAVGNPAAAMQGAALQGPG
MQGVSIQGAGMQGAGLQGVGMQGGGMQGAGMQGAGMQGAGKQGGGQPSSFSPGQSQVTPQ
DQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcctggcggtgcgagaccccgccatggaccgctccctgcgctccgtgttcgtg
ggcaacatcccgtacgaggcgacggaggagcagctgaaggacatcttctcggaggtgggc
tcggtggtgagcttccgcctggtgtacgaccgcgagacgggcaagcccaagggctacggc
ttctgcgagtaccaggaccaggagacggcgctgagcgccatgcgcaacctcaacggccgc
gagttcagcgggcgcgccctgcgcgtggacaacgcggccagcgagaagaacaaggaggag
ctcaagagcctgggccccgccgcgcccgtcatcgactcgccctacggggaccccatcgac
cccgaggacgcccccgagtccatcacgcgcgccgtagccagcctcccgcccgagcagatg
ttcgagctcatgaagcagatgaagctctgcgtgcagaacagccaccaggaggcccgcaac
atgctgctgcagaacccgcagctggcctacgccctgctccaggcccaggtggtgatgcgc
atcatggaccccgagatcgccctcaagatcctgcaccgcaaggtccacgtcgcgcctctc
atcccaggcaaaaaccagcccgtctccgggcccgggcccggccctggacccggccccggc
cctggccctggccctgggcccagtcctgggctctgccaggctcctggggtgctgctgagt
caaccgaatccgtctgcgcctcagccccaacatctggctcggaggcctgtgaaggatatt
ccgcctctcatgcagacccccattcaaggaggcatccccgctcccgggcccatgccagct
gccgtccccggacccgggcctggacccgggccgggcgccctcactcctggcggggcgatg
caaccccaggttggaatgccaggggtggtggggccggtgcccctggagcgtgggcaagtg
caggtgcaggtgcagatggcggatccccgagcccccatgccccgtgggcccatggctgcc
ggcggcctcccacctcgaggactgttgggagatgcgcccaatgacccccgtggagggact
ttgctttccgtcaccggagaagtggagccccgaggctacttgggccccccacatcagggg
ccccccatgcaccatgcctctgggcatgacggccgaggcccctcggcgcatgagatgaga
ggaggcccgatggcagatcccaggctgctcattggggagccccgggggcccatgctcgat
cagagaggtctaccgatggatggcagaggtggcagagatgccagaggtctggaggcgcgg
gctctggagactgaggtgttggagagccgcgtgatggagagaagaggaatggagacctgc
gccctcgagaacagagccatggaagccagagcgatggaagcacgagcgatggaagccaga
ggaatggagatcaggggccctgttcccacttcgagaggccccatgactggtggaattcag
ggtcctggacccattagtatgggggcaggtggtcctcaggggcccagacaggtccccaat
attgctgcggtgggcaatcctgcagctgccatgcaaggagctgccctgcagggccctggc
atgcagggggtaagcatccagggagctggtatgcagggagcaggcttacagggagttggc
atgcaaggaggaggcatgcagggggcaggcatgcagggggctggtatgcagggagctggt
aagcaaggtggaggccagcccagcagttttagccccgggcagagccaggtaactccacag
gatcaagaaaaggcagctttgatcatgcaggttctacaactaaccgctgatcagattgcc
atgctgcctccagaacaaaggcagagtatcctgatcttaaaggagcagatccagaagtcc
actggggcttcttga
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