Suncus etruscus (white-toothed pygmy shrew): 125995162
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Entry
125995162 CDS
T09902
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125995162 (MED13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
125995162 (MED13)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125995162 (MED13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_C
Motif
Other DBs
NCBI-GeneID:
125995162
NCBI-ProteinID:
XP_049620635
LinkDB
All DBs
Position
1:complement(173409998..173515397)
Genome browser
AA seq
2038 aa
AA seq
DB search
MSSSLVPNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGEDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHITLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLISEWKQFY
PISSCLKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPPPSSVGSSH
CSTSCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSTQKWVKFSSVSDGFSSDST
SHHGGKIPRKLANHVVDRVWQECNLNRAQNKRKYSASSSGVCEEEIADKIACWDFVEATQ
RTSCSCLRHKTLKPRNPGQQGQTPLLNQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRVS
ISDDVGMDTDSTSQRLVISTSDSQVRFSNIRTNDIAKTPQMHGTEISNSPQPPPLSPHPC
DVVDEGVTKTPSTPQSQHFYHMPTPDPLVPSKPMEDRIDSLSQSFPTQFQETVEPTVYVG
TAVNLEEDETNRTWKYYKVPKKKDIEFLPPQLPSDKFKDDPVGPFGQESVTSVTELMVQF
KKPLKVSDELVQQYQIKNQYLSAIASDAEQEPKIDPYAFVEGDEEFLFPDKKDRQNNERE
AGKKHKVEDGPSNITVLSHEEDAMSLFSPSIKQDAPRPTSHARPPSTSLIYDSDLAVSYT
DLDNLFNSDEDELTPGSKKSANGSDDKASCKESKTGNLDPLSCISTADLHKMYPTPPSLE
QHIMGFSPMNMNNKEYGSLDTTPGGTVLEGNNSIIGTQFKIEVDEGFCSPKPFEIKDFSY
VYKPENCQVLVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLELLPSGSALPFIK
EGEGSTMDQEYGPAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPRTP
RGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESV
MNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSSGLF
LEDELDIIGRNTDCGKEAEKRFEALRATSTEHVNGGLKDSEKLPDELILLLQDQCTNLFS
PFGADQDLFPKIGLTSNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKSSCLH
PWSKRNDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSY
GTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVLCPENEALL
NGAKGFFRDLTAIYESCRLGQHRPISRLLSDGIMRVGSTASKKLSEKLVAEWFSQAADGN
NEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPTSQSLITPPQMTNTGNANTS
SATLASTASSTMTMTSGVAISSSVATANSTLTTTSTSSSSSNLNSGISSNKLPSFPPFGS
MNSSATGSMSTPTSTVQNSQLGGQQSSVLQTSGISGESSSLPTQPHPDVSESTMDRDKVG
IPTDGDSHAITYPPAIVVYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKS
TVSVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLA
METALKSPDRPECIRLYSPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWI
LASCTDLYGELLETCIINIDVPNRARRKKGSARRCGLQKLWEWCLGLVQMSSLPWRVVIG
RLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSF
VIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDL
AFNPGNDGENGMVIFDLLDTGDDLDPDIISILPASPTGSPVHSPGSHYPHGGDAGKVT
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccttagtgccgaacggggccagcctggaagattgtcactgcaacctcttc
tgcctggccgacttgactggaattaaatggaaaagatatgtatggcaaggcccaacttct
gcccctattctatttccggtgacagaggaagaccccattttgagcagttttagtcgctgc
cttaaggcagatgtacttggtgtttggcggcgagatcaaagacctggaagaagagaattg
tggatattctggtggggtgaagaccctaattttgctgaccttattcaccatgacttatca
gaagaggaagatggagtatgggagaatggactttcctatgaatgccgtactctacttttc
aaagcagttcataatctgttggaacggtgtttaatgaacaggaactttgtacgcattggc
aagtggtttgtaaagccttatgaaaaagatgaaaaacctataaataaaagtgaacatttg
tcctgctcattcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcaacctgtataccttcttagtgaagaacatattacccttgctcaacagtca
aacagcccatttcaagttatcctaagcccatttggactaaatggcactctcacaggacaa
gcattcaagatgtctgattcagccacaaaaaaattgataagtgaatggaaacagttctat
cccatctcttcttgcttaaaggagatgtctgaagaaaaacaagaagacatggattgggaa
gatgattctttagctgcagtggaagttcttgttgctggagtccgaatgatctacccagca
tgctttgttctagtccctcagtcagatattcctcctcctagctctgtgggatcctctcac
tgttcaacttcttgcttgggtgtccaccaagtgcctgcttccacaagagatcctgctatg
tcttcagttactcttacaccccctacatctcctgaggaagtccaaacagttgatcctcaa
tctactcagaagtgggtcaaattttcttcagtatctgatgggttcagctctgatagtact
agccaccatggtgggaaaatacccagaaaattagcaaatcatgtggtggatagagtttgg
caagaatgcaatctgaacagagcacagaacaagaggaaatattcagcttcatcaagtggt
gtgtgtgaagaagagatagctgataaaatagcctgctgggattttgttgaagctacacag
agaaccagttgcagctgcttgaggcacaaaactctgaaaccaagaaatcctgggcagcag
ggacagactccattgttaaatcagcaacaagtacttcctaagcacaagaccaatgaaaaa
caagaaaagagtgaaaaaccacagaaacgtcccttaactccttttcaccatcgagtatct
attagcgatgatgttggcatggacacagattcaactagccaaagactcgtgatctctact
tcagatagtcaagtgagattttcaaacatccgaactaatgatatagcaaagactcctcag
atgcatggcactgaaatatcaaattcacctcaaccacctccacttagtcctcatccctgt
gatgtcgttgatgaaggagtaactaaaacaccttcaactcctcaaagtcaacatttttat
catatgccgacacctgatcccttggttccttctaaaccaatggaggataggatagacagt
ttatcccaatctttcccaactcagtttcaggaaactgtagaacctacagtatatgttggt
acagcagtaaacttggaagaagatgaaactaatagaacctggaagtattacaaggtccca
aagaaaaaggatattgagtttttaccacctcagcttccaagtgataaattcaaggatgat
ccagttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcaattt
aagaaacctttaaaagtttctgatgaattagtgcagcaatatcaaattaaaaatcagtat
ctttcagcaatagcatctgatgcagagcaagaacctaaaattgatccttatgcatttgtt
gaaggagatgaagaatttctttttcctgataagaaagatagacaaaataatgaaagagaa
gcaggcaaaaagcataaggtagaagatggtccatctaatattacagtgctatcccatgaa
gaagatgctatgtcattatttagtccttctataaagcaagatgctccacgccctaccagt
catgctcgtcctccatcaaccagtttgatatatgactcagatttggctgtctcttatact
gatctagataatctcttcaattctgatgaagatgaattaacacctggatctaaaaaatca
gcaaatggatcagatgataaagccagctgcaaggaatcaaagacaggaaatctggaccca
ttatcttgtatcagcactgcagatcttcataaaatgtaccctacaccaccgtcattagag
caacatattatgggattttctccaatgaatatgaataacaaggaatatggtagcctggat
acaactcctggaggaactgttctagaaggaaataattctattataggaactcaatttaaa
attgaggttgatgaaggattctgtagccccaaaccttttgaaattaaggatttttcttac
gtctataagcctgaaaattgtcaagttttagttggatgttctatgtttgcacctttaaaa
actctaccgagccaatgtttgcctcctatcaaattgccagaagagtgtatttatcgtcag
agttggactgttggaaaactggaattgcttccttcaggatctgcattgccattcatcaaa
gaaggtgagggaagtactatggatcaagaatatggccctgcttatacacctcaaactcac
acttcttttggaatgcctcctagcagtgcacctcctagtaacagtggagctgggatcctg
ccttctccatcaactcctaggtttccaactccaaggacacctcggactcctcggactcct
cgtggagctggaggccctgctagtgctcaaggttcagtcaaatatgaaaattcagactta
tattcaccagcttccaccccatccacctgcagaccccttaattctgttgaacccgcaact
gttccttccatacctgaagcacatagtctttatgtcaacctcattctttcagaatcagtt
atgaatttatttaaagactgtaactttgatagttgctgtatctgtgtctgcaatatgaat
atcaagggtgccgatgttggagtttacattccagatcccacacaggaagcacaatatagg
tgtacctgtggcttcagtgctgtcatgaatagaaaatttggaaacagttcaggattattt
ctcgaagatgaactagatattatcggacgcaacacagattgtggcaaagaagctgaaaaa
cgttttgaagctctcagggctacttctactgaacatgttaatggaggactaaaggattct
gaaaaattgcctgatgaattaatattattgctgcaagatcagtgtactaatttattttca
ccctttggagcagaccaagatctttttcccaaaatcggtttaactagcaattgggtccgg
gtggaggagagggactgctgtaatgactgctatcttgcattagaacatggccgtcagttt
atggataacatgtcaggaggaaaggttgatgaagcacttgtgaaaagttcatgcttacat
ccctggtccaaaagaaatgatgtgagtatgcagtgctcacaggatatacttcgaatgctc
ctatcccttcagccagttcttcaggatgctattcagaaaaaaagaacagtaaggccttgg
ggggttcaaggtcctctcacttggcaacaatttcataaaatggctggccgaggctcttat
ggaactgatgaatccccagaaccactgccaatccccacgtttttgttgggttatgattat
gattttctggtgctttctccttttgctcttccttattgggagagattgatgctggaaccc
tatggatctcaaagagatgtagcctatgttgtactgtgtccagagaatgaagctttgtta
aatggagccaaaggcttttttagagatctgactgcaatatatgaatcatgtcgattgggt
caacatagacctatttctcgactgttatcagatggaatcatgagagttggatctactgca
tcaaagaaactatcagaaaaattggtagcagaatggttttctcaggcagctgatggtaac
aacgaagcattttctaaactcaaactgtatgcacaagtttgcagatatgacctaggtcct
tatcttgcttcccagccattggacagctctctactttcccagccaaatttagttgcccct
acaagtcagtctttgattactccaccacagatgacaaatactggaaatgctaatacttca
tctgccaccctagcatctacagcaagcagcactatgacaatgacttcaggtgttgccata
tcttcttcggttgccacagccaactcaactttgaccacaacttcaacttcatcatcatct
tccaacttgaacagtggaatatcatcaaataaactaccttcatttccaccctttggcagt
atgaacagcagtgctacaggatccatgtctacaccaacgagtacagtccagaatagtcaa
ctaggagggcaacagtcatcagttctacaaacatctgggatttctggagagtcatcttca
cttcccacacagccacatccagatgtgtctgaaagcactatggatcgggataaagtgggc
attcctacagatggtgattcacatgcaatcacctatccacctgcaattgttgtttatata
attgatccttttacatatgaaaataaagatgagagcactaattcatctaatgtttggact
ttggggctacttcgttgttttttggaaatggtccagactcttcctcctcatattaagagt
actgtttctgtacagattgttccttgtcagtacctgttgcaacctgtgaagcatgaagat
agacaaatctatacccagcatttaaaatctttagctttctcagtctttacccagtgtcgg
agaccactccccacatcaaccaatgtgaaaacattgactggctttggtccaggtttagcc
atggaaactgctctgaaaagtcctgatagaccagagtgtattcgactttattcacctcct
ttcattctggctccagtgaaagataaacagacagagctaggagaaacatttggagaagca
ggacagaaatacaatgttctttttgtgggctactgcttatcacatgatcaaagatggatt
cttgcatcttgcacagatctgtatggagaactcttagaaacttgtatcattaacattgat
gttccaaatagggctcgtcggaaaaaaggttctgctcgaagatgtggtctacagaaactt
tgggagtggtgcttaggactggtacaaatgagttcattgccatggagagttgtaattggc
cgtctaggaaggataggtcatggagaattaaaagattggagctgtttgctaagtcgtcga
aacttgcagtctctaagtaaaaggcttaaagatatgtgtcgaatgtgtggtatctctgcc
gcagactctcccagcattctcagtgcttgtttggtagcaatggaacctcaaggctctttt
gttattatgccagattctgtctcaactggttctgtgttcggaagaagtaccactttaaac
atgcagacatctcagttaaatactccgcaggacacatcgtgtactcatatacttgttttc
cctacttctgcttcagttcaagtagcttcagctacttacaccactgaaaatttagattta
gctttcaatcctggcaatgatggcgagaatggaatggttatttttgatttattagacaca
ggagatgatcttgatcctgatattattagtattcttcctgcatctccaactgggtctcct
gtacattctccaggatctcattaccctcatggaggcgatgctggcaaggtaacctga
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