Suncus etruscus (white-toothed pygmy shrew): 125995685
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Entry
125995685 CDS
T09902
Symbol
TAPBP
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04612
Antigen processing and presentation
setr05163
Human cytomegalovirus infection
setr05168
Herpes simplex virus 1 infection
setr05169
Epstein-Barr virus infection
setr05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
125995685 (TAPBP)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125995685 (TAPBP)
05168 Herpes simplex virus 1 infection
125995685 (TAPBP)
05163 Human cytomegalovirus infection
125995685 (TAPBP)
05169 Epstein-Barr virus infection
125995685 (TAPBP)
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Gene cluster
GFIT
Motif
Pfam:
ig
C1-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
125995685
NCBI-ProteinID:
XP_049620651
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All DBs
Position
18:complement(37424578..37436717)
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AA seq
443 aa
AA seq
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MKSAILLLLAVALGCARAWAGPAVLECWFVQDAGGGRLDKLRAALLLRPASGPAPPRPDL
DPKFYLQVQDPAGALQAAFQRFPRDGPAPRCEMSNYVLLPASAHWAAGLTPEPSCPRSLD
GAWYLASVTSPLLSLACLLRPQLQPSGDPGITPSTAVLTVFSYTPVPQIRLGQDAVLDLR
FAYAPPPTIGAAPAPGPPPFGLEWRRQHLGKGHLLLAATPKLQGLLPKAQEGAVAFAAWN
DEDDPRGPWTGNGTLVLPAVRPAQEGTYLATVHLPYLQGQITLELGVQKPPKVSLMPAPL
VWAAPGEAPPELVCLVSRFYPPEGLEVVWELRDGPGGTSQKVKEPQWLSALRHHSDGSVS
VSGHLQLPPVTSEQHGARYFCRIRHPTLPASVRTAEVTLEVAGLSGPSLEDGVGLFLSAF
FLLGLFKVLGWVGECEPHQNPPL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgcaatcctgctcctgctcgccgtggccctgggctgcgcgcgcgcctgggcc
gggcccgccgtgctcgagtgctggttcgtgcaggacgcaggcgggggccgcctggataag
ctccgcgcggccctgctgctgcgcccggcctcgggccctgcaccgccccggccagacctc
gaccccaagttctacctccaggtgcaggacccggcgggcgccctccaggccgccttccag
cgcttcccccgggacggccccgcgccgcgctgcgagatgagcaactacgtcctgctgccc
gcgtccgcgcactgggccgccggcctgacccccgagcccagctgcccgcggagcctcgac
ggcgcctggtacttggccagcgtcaccagcccgctgctcagcctggcctgcctcctgcgc
ccgcagctccagccctcgggggacccggggatcaccccctctacagctgtgctgaccgtc
ttctcctacacccctgttcctcaaatccgtctgggacaagacgctgtgctggacttgaga
tttgcctatgcacctccacccaccattggggctgctcctgccccagggccccctcccttt
gggctggagtggcggcgccagcacctgggcaaggggcacttgctcctggctgccactccc
aagctgcaggggctgctgcccaaagcccaggagggcgcagtggcctttgctgcttggaat
gacgaggatgatccgaggggcccatggactggaaatgggactcttgtgctgcctgcggtc
cggcctgcccaggagggcacctacctggccactgtccatttaccctacctgcaagggcag
atcaccctggagcttggggtacagaagccccccaaggtatctctgatgccagcacctctt
gtgtgggctgcacccggggaagctcccccagagctggtctgccttgtatcccggttctac
cctcctgagggcctggaagtggtgtgggagctccgggatggccctggaggtacctcccaa
aaggtcaaggagccccagtggctctcagcactgcgccaccactcggatggttccgtcagc
gtctcaggacatctgcaactgcccccggtcacatccgagcagcacggggcccgctatttc
tgccgcatccgacaccccactctgccagcttctgtgcgcactgcagaggtcaccctggag
gtggcaggtctctcaggaccctccctggaggatggtgttggccttttcctgtctgccttt
ttcctccttgggctcttcaaggtgctgggctgggttggtgagtgtgaaccccaccagaac
cccccattgtga
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