Suncus etruscus (white-toothed pygmy shrew): 125995712
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Entry
125995712 CDS
T09902
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125995712 (VPS52)
Membrane trafficking [BR:
setr04131
]
Protein recycling
Others
EARP complex
125995712 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
125995712 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Sec3_C-term
Dor1
COG6_N
ATG16
Motif
Other DBs
NCBI-GeneID:
125995712
NCBI-ProteinID:
XP_049620681
LinkDB
All DBs
Position
18:complement(37369453..37385740)
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AA seq
724 aa
AA seq
DB search
MAAAATMAAAARELVLRAGASDMEEEEGPLGVGPGGLQEPLQLGELDITSDEFILDEVDI
HIQANLEDELVKEALKTGVDLRHYSKQVELDLQQIEQKSIRDYIQESENIASLHNQITAC
DAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPS
ALVTAILEAPVTEPRFLEQLQELDAKSAAVREQEARGTAACADVRGVLDRLRVKAVTKIR
EFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIKDEYVETLSKIYFSY
YRSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTEL
EAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFMVSGPAAHDLFHAVM
GRTLTMTLKHLESYLTDCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPR
FELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQL
QVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQE
FIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQD
VMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRTLPARAELINIHHLMVELKKH
KPNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgcgaccatggcggccgccgcccgggagctggtgttgcgggctggggcc
tcggatatggaggaggaggagggtccgctgggggttggtcctggaggtcttcaggagcca
ttgcaacttggggagttggatatcacctctgatgaatttatcctggatgaagtagacatt
catattcaggcaaatctggaggatgaattagtaaaggaagccctgaaaacaggtgtggat
ctccgtcactattcaaagcaagttgagttggatctacagcagattgaacagaaatccatc
cgggattatattcaagagagtgagaacatagcatctctgcacaaccagattacagcctgt
gatgctgtccttgagcgtatggagcagatgctgggagcttttcagagtgacctaagctcc
ataagctcggagatccggacactgcaggaacagtccggagccatgaacattcgccttcga
aaccgccaggcagttcgtgggaaacttggggagctggttgacggcctggtggtgccctct
gctctggtcacggcaattctggaggcgccagtgactgaaccaaggttcctggagcagcta
caggagctggacgccaagtcagcggctgtgcgtgaacaggaagctcgaggcacagcggcc
tgtgcggatgtccgaggcgtgcttgaccggctccgggtgaaggcagtgacgaagatccgg
gagttcatccttcagaagatctattccttccgaaaacccatgaccaactatcagattccc
cagacggccctgctgaagtacaggttcttttatcagtttctgctgggcaatgagcgagcc
acggccaaagagattaaggatgaatacgtggagacgctgagcaagatctacttctcttac
taccgctcttacctggggcggctcatgaaggtccagtatgaggaagttgccgagaaggat
gacctcatgggtgtggaagatactgccaagaaaggattcttctcgaagccctccctccgc
agcaggaacaccatcttcaccctgggcacccggggctcggtcatctctcccaccgaactg
gaagcgcccatcctggtgccccacactgcccagcgcggagagcagcggtatccatttgag
gccctgttccgcagccagcactacgcccttctagacaactcctgccgcgagtatcttttc
atctgtgaattcttcatggtgtctggcccagccgcacatgacctcttccatgcagtcatg
ggccggacgctcactatgaccctgaaacacctggagtcctaccttaccgactgctacgat
gccattgcagtgtttctctgcatccacattgtccttcggttccgcaacattgccgccaag
agggacgtgcctgccctggacaggtactgggagcaggtacttgccttgctgtggccacga
tttgagctgatcctggagatgaatgtccagagcgtccgcagcactgaccctcagcgcctt
ggagggctggacacccggccccactatatcacacgccggtatgcagagttctcctctgct
ctcgtcagcatcaaccagacaattcccaacgaacggaccatgcagctgctgggacagctg
caggtggaggtggagaattttgtcctccgagtggcagctgagttctcctccagaaaggag
cagctggtgtttctgatcaataactacgacatgatgctgggtgtacttatggagcgagct
gcagatgacagcaaagaggtggagagttttcagcagctgcttaatgcacggacccaggaa
ttcatcgaagagttgctctcgcccccttttgggggtctagtggcatttgtgaaggaggct
gaggctttgattgagcgtggacaggctgagcggcttcgaggggaagaagcccgggttacc
cagctgatccggggctttggcagttcctggaagtcatcagtggagtctctgagccaggat
gtaatgcggagtttcaccaacttcagaaatgggaccagcatcatccagggagccctgacc
cagctgatccagctctaccatcgcttccaccgggtcctgtcccagccccagctccgcacc
ctccctgcccgggctgagctcatcaacattcatcacctcatggtggaactcaagaagcac
aagcccaacttctga
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integrated database retrieval system
