KEGG   Suncus etruscus (white-toothed pygmy shrew): 125995782
Entry
125995782         CDS       T09902                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:setr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:setr03400]
    125995782 (MDC1)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125995782 (MDC1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 125995782
NCBI-ProteinID: XP_049620727
LinkDB
Position
18:complement(33689849..33707372)
AA seq 1581 aa
MEATQIIKWEDEEEEETEGPSEPLGCNLEPVGRLHFFSSPHAPEKDFSLYLGKNVVGRMP
DCSVVLPFASISKQHAVIEILAWDKAPILRDCGSLNGTQILRPPKVLKQGMSHRLRDLEL
ILFGDLPCQYYRLNAPKPFVSRGPLTVEETPRVKGETQKGILLVEDSEEEVEPTIEEPKH
TSSSLTSIVPESDEEGGIPTSPIVFKLDSDTDEEEIQSPVLAANFFNSRRGATTETEQPK
ADGAAAEFQIAKNLCAVKEKGHDSKVNRDAKKEAIAEGMNLENIKVVSEDSDTDVDDESI
STSQLAGIHIEITQPFDFSDNDTDVEEEIPATPAIVPVKKRPVIRGIGTKGPGLPDVTHQ
QENLTDVEESKAPLLALLERNQGFMAIDSKKDEKEEISTALTLAPLKESLAITCNIEGNR
AQPVGLLKQNQTSTMRNSDTDMKEQGFPVEKQGRTVSEDHPDKAYLEKSQPPLGNSDKGI
GNNLPVVFLERSQASATGVINKQVEEKQPIPVISTNQRDVEEGDPRKLFVAAQPPPAKAC
ETDVEEGTSLPSSAVADASKSQVGTEGSMATLEQKRTLEAGVLGGLPIIQVEQDHRPFSK
ENPTDLVVNIGIPWEESTQSFLVKEEKHDVSRTKDSGDNHDALPNSEDLDLQATQCFVKK
ETESPEVVHRVEDESTQAFLLHLPKEPGPSLQVQDSLDNSWDVLATQPFCPRELKALKSE
PTTDFPENKTESCPFSPGVALQDQHPESPVPTEPQGIKEKETQMIQTMKKDLSIPRNGVL
NCWIPISEISGGDQEAPDVSLPSAVPEPSASHQNPLIFQNPKLTGSQALLSPSSECPKTR
QKRNQKTSETPLSAKLKPLPTKPKVKTRESSRKAPSLVSSLDLESHLITSTDQPISSEPT
SCVTRGRSCRSSVETPELSIPMATELQPSASTDQAVIPRLTSQASRRRTRRSSLKTPEPG
ESIAPELQLSFVDDQPVASKSTSHMIRTRRSSVKTPEPVVPTAPELQPSTCEEQLVSPKS
TSRVTRRKANRSSVKIPEPAVPSAPEHQLSTTPVSPEPTFHATRSRTRSSSAKTPEPALP
ASRLQPTVPTDEPIPLGIIQGRTHRSIQNPKQADPQIPELQPSTSTDQPEPSSRTTRGKA
RRSSVQTSQSSEPTLFELSPTNQSHIPETKAQHGQSKMPRLSLVSAVPMPATPKSQLPIL
TEQLTLQPIPQAYCSKKPKASKKHGSLMVTDVREVCSATPEPNSQSSRSQRLAMRAAKTL
QTTPESVIAQCPHSLAHSSKIQKEEATCRSGHTPQSQPKISQSLKRSFVTVDSPPLQKRL
KRGKISQKTTFLKEKEEETTVNPENKKDVVMPEAGKKRAQAKEEPEGIAKRSLRHNKPNQ
DSTAPKVLFTGVVDERGKQILLDLGGSLANSVAEASYLVTDRIRRTVKFLCALGRGIPIL
SLDWLYKSYKARRFLPPDDYIVIDPEHEKNFAFSLKESLNRAQERKLLEGYEIHVTPGVQ
PPPAQMGEIISCCGGTLLTSMPRVYKPQRVVITCSQDFHRCSIPFRVGLPVLSPEFLLTG
VLKQEAKPEAFIFSTLERSST
NT seq 4746 nt   +upstreamnt  +downstreamnt
atggaagccacccagattattaaatgggaagatgaagaagaggaggaaacagagggaccc
agtgaacccttagggtgtaacttggaacctgtagggcgactgcatttcttcagtagtccc
catgcaccagaaaaagatttctcactctacctggggaagaatgtggtgggtcgaatgcct
gattgctctgtggttctgccctttgcatccatctccaaacaacatgcagtgattgaaatc
ttggcctgggacaaagcacctatcctccgagattgtgggagccttaatggtacacagatt
ctgaggcctccaaaagtcctgaaacaaggaatgagtcatcgcctgagggacctggagtta
attctgtttggtgatttaccctgccagtattatcgcctgaatgcccccaagccttttgtt
tccagaggccctctaactgtagaggagacaccgagagttaagggagaaactcaaaagggg
atcctgttggttgaggactcagaggaggaagtagaacctactattgaagaaccaaaacac
acatcttcctctttgacatcaatagttccagagagtgatgaagagggtgggatacctacc
tcacctattgtcttcaaattggacagtgacacagatgaagaagaaattcagtcaccagtt
ttagcagcaaacttctttaattccagaagaggtgccactacagaaacagaacagcctaaa
gctgatggagctgcagctgagttccagattgcaaagaatctgtgtgcagtgaaggaaaaa
ggccatgacagcaaagttaatagggatgcaaaaaaagaggcaattgcagaagggatgaac
ctggaaaatatcaaagttgtcagtgaggacagtgacacagatgtagatgatgagagcata
tccacaagtcagcttgctggaatccatatagaaataacacagccttttgacttcagtgac
aatgatactgatgtagaagaagagatacctgcaacccctgctatagttcctgtgaagaag
aggccagtcatccgtggaattggcacgaagggccctgggttacctgacgtgacacatcag
caggagaatctgacagatgtggaagaaagtaaggccccactgttggctcttttggagaga
aatcaaggcttcatggcaattgacagcaagaaggatgaaaaggaagaaatctcaacagct
ctcactcttgcacctctaaaagaaagcctcgccattacctgcaacatagaagggaacaga
gcacaacctgtgggtcttctgaaacagaaccaaacctccactatgagaaacagtgacaca
gacatgaaggagcagggattccctgtagaaaagcaagggagaactgtctctgaggatcac
ccagacaaggcatatctagaaaagagccaacctcctcttgggaacagtgataaagggata
ggtaacaatttacctgtggtcttcttggagagaagccaagcctctgctacaggggtcatc
aacaaacaagtagaggaaaagcagcctatacctgtgatatcgacaaatcaaagagatgtg
gaagaaggggatccaagaaaactttttgtagcagcccagcctcctccagctaaagcctgt
gaaacagacgtggaagagggcacatccttaccatcctcagcagtggcagatgcaagcaag
agccaagttggcacagaggggagtatggccactcttgagcaaaagagaacacttgaggca
ggagttctgggtgggttacccattatacaagtggagcaggaccatcgccctttctcaaag
gagaacccaacagatctggtggtgaacataggtattccatgggaagaatccactcagagc
ttcctagtaaaggaggaaaagcatgatgtcagcagaaccaaggactcaggagataaccat
gatgctttaccaaattctgaagatttagacttgcaagccacccaatgctttgtgaagaaa
gaaactgagagcccggaagtagtccatcgtgtggaggatgaatccactcaagccttcctg
ttgcacctacccaaggaacctggaccttccttgcaggtccaagattccctggacaattca
tgggatgtcttggctactcagccattctgtccaagagagttgaaggccctgaagagtgag
cctactacagacttccctgaaaacaagactgagtcttgccccttttcacctggagtagca
ctgcaagaccagcatcctgagagtcctgttcccaccgagccacaggggattaaagaaaaa
gagacacagatgatacagactatgaagaaagacttgagtataccaagaaatggcgtcttg
aattgctggataccaatctctgagatttccgggggtgatcaggaagctccagatgtttcc
ctgccttctgcagtacctgaaccctcagcctcacaccaaaaccccctcatctttcagaac
ccaaaactaactggatctcaggccctactctctccatcttcagagtgccccaagaccagg
caaaaaaggaatcagaaaacttctgagactcccttgtctgcaaagctgaaaccactcccc
acaaaacccaaagttaagactcgggagtcttctagaaaggctccctctctagtttcttca
cttgaccttgagtcccaccttatcacttcaacagaccagcccattagctctgagcccaca
tcttgtgtcactagaggcaggtcatgcagatcttctgttgagactccagaactaagcatc
cctatggccactgagctccagccttctgcttccacagaccaggctgtcatccccagactc
acatctcaggcctctaggagaaggacacgtagatcctctcttaagactccagaaccaggt
gaatctatagctcctgagctgcagctttccttcgttgatgaccaacctgtcgcttctaag
tctacatctcacatgatcaggacccgtagatcctctgtcaaaacccctgaaccagttgtc
cccacagctcctgagctccagccttctacctgtgaagagcagcttgtctccccaaaatcg
acatcccgggttactcggagaaaggctaataggtcttctgtcaagattcctgaaccagct
gtcccctcagcccctgaacaccagctttccaccaccccagtttcccctgagcccacattt
catgccactcgaagtaggacacgaagttcttcagccaaaacacctgaaccagctctccca
gcctccagacttcagcctactgtccccacagatgaacctatcccattggggattattcag
ggcagaacacatagatctattcaaaatcccaaacaagctgatccccaaatccctgagctt
cagccttccacttccacagatcaacctgagccctcatctcggactactcgaggcaaggca
cgtaggtcatctgtgcagacctcccaatcctctgaacctacactctttgaacttagcccc
acaaaccagtctcacatccctgagaccaaagctcagcatggtcagagcaagatgccgagg
ttgtctttagtaagtgctgtgccaatgcctgccacccctaaatctcagttacccatcctc
acagaacaacttaccctccagcccatccctcaagcgtactgcagcaagaagccaaaggcc
agtaagaaacatgggtccctcatggttactgatgtccgtgaagtgtgctctgcaactcct
gagcctaattctcagtcatcaaggagccagagactagctatgagagcagccaagaccctt
caaaccacacctgagtctgtcattgctcagtgtcctcattcacttgctcattcttctaaa
atccaaaaagaagaggcaacctgtagatctggacataccccacagtcccaacctaagatc
tctcaaagtctaaagaggtcttttgtcactgtggattcacccccacttcaaaaacgactc
aaaagagggaagatttctcagaagacaacattcctcaaggaaaaggaagaagagacaaca
gtgaaccctgaaaacaaaaaggatgttgtgatgccagaagcaggcaagaagagagcacag
gccaaggaggagccagagggaatagcgaaacgaagcctccgacacaacaaaccaaaccaa
gattccacagcccctaaagtgcttttcacaggcgtggtggatgagcgaggcaagcagata
ctgctagatcttggggggagcctagccaattcagtagcagaagcttcatacctggtgact
gaccgaattcgacgaacggttaagtttttgtgtgccctgggacggggcattcccatcctc
tccttggactggctgtacaagtcctataaggctcgtcgcttcctacccccggatgattat
attgtgatagatcctgaacatgagaagaattttgccttcagccttaaagaatccctgaat
cgggctcaagagcggaaactgttggagggttatgagattcatgtgacccctggggttcag
ccaccaccagcccagatgggagagatcatcagctgctgtggaggcactctcctaactagc
atgcctcgggtctataagcctcagagagttgtgatcacatgctcccaggactttcatcgt
tgctccattccatttcgagttggactgcccgtcctttcacctgaattcctactcacagga
gtgttgaaacaggaagccaagccagaggccttcattttctctactttggaaaggtcatcc
acctga

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