Suncus etruscus (white-toothed pygmy shrew): 125995832
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Entry
125995832 CDS
T09902
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03250
Viral life cycle - HIV-1
setr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125995832 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125995832 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125995832 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
125995832 (NUP153)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125995832 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
125995832
NCBI-ProteinID:
XP_049620763
LinkDB
All DBs
Position
18:complement(47432308..47506240)
Genome browser
AA seq
1767 aa
AA seq
DB search
MGNWRRGRPACDVTRRDARTHARARLAREPGAALAEAPQEAAGGGDDGGGGGFFPRNYGS
QFGVTEEEPPSSSRLGRPSVTHTEEGGGSADARSCVRAQPPSRVRSLARSRVVCAPTAPP
PPPPPPPRVASSRPYRASSRESPRRGEARRGAARRDLRRDLRRDWTGRGARSAEGAAPRL
ASPRGGLGGRAGAGARRLPPPLPAPAMASGAGGAGGGVGGGKIRARRCHPGPVKPYQPGR
PQPRAQAQPQVSAGPGGRACVCVLPLRGPRPAERGGRDRKWPRRRRPGRDRGSHVRARSR
FAGRAPALPRSLARSRTHTRPLSLARTCFSEPPLCFSSQQGILSRVTESVKNIVPGWLQR
YFNKNEDVCNCSTDTREVAQWSENREGDHLVYADEENSNIHDGRITPEPTVSNTEEPSTT
STASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQH
DDDNISTTSGFSSRASDKDIAVTKNTSVPPLWSPEAERSHSLSQHTATSSKKPAFNLSAF
GTLSPSLGNSTLKTSQLGDSPFYPGKTTYGGAAAALRQPKLRNSPYQAPVRRQMKAKQLN
AQSYGVTSTTARRILQSLEKMSSPLADAKRIPSVVSSPFNSPLDRSVIDATTDFQAKREK
VDSHYPPVQRLLTPKPLSIATNRTVYFKPSLTPSGELKKTNQRIDKKHSIGYEKNTTTGQ
NRERESSFSYPNFSTPAANGLPSGISSGGGKMRRERIHFAAAKVPEEEEMEVPVLPKISL
PITSSSLPTFNFSSSVITTSSSPIASSQSLTNKQVQMTSSNSTGSPMFRFSSPIVKSTEA
DELPPSSIGFTFSVPVAKTTELSGSGNDSEPIPSSSAQDIPTMNSNSCKKLSEDYEGPFK
PAKVMKEGNIVDTQKFSGFSSPKTESFAAQPTTTSPVVYTRPAISSFSSSGIGFGESLKD
GSMWQCHICLVQNKVTDSKCLACQATKLSKDTAKQTGIGTSSKNCKPAPSASGTGFGDKF
KPAVGTWDCDTCLVQNKPEAIKCVACETPKPGTGVKRVLTRPVSSESSVTVATTSFSSTV
TTGTLGFGDKFKRPVGSWECPVCCVVNKAEDNKCVSCMSEKPGTSVPASSSSTIPVSQAS
GVFSGFDKFKKPEGSWNCDVCLVQNEAFRTKCAACESAKPGTQSELKGFGTSSSSSNSGA
SAFKFGLPSTSSGLPQTVSNTGTFKFGDQEAFKIGVSSDSGPVNPVGESFKFSKPMGDFK
IGISPDLKPEEAKESKTEVNFKFGIPASSSNPSSATPFQFGVSNLGQQEKKEELSKSSAA
SFSFGTATVNTTLTSENQSNCSFGTLETKSVSAAPFTCKTLEAKKEEMPTAKTGFTFGKT
EPSPLPPASLFALGRTEEKQQEPVTSTSLVFGKNTDNEEPKCQPVFSFGSSEQTKDENPS
KSNFSFSIAKSSEKESEQPTKATFAFGVQTSTTADQGAGKQGFSFLNSNSSNSSTTATSA
VGGLFGGATSSNAPGTAFLFSQASSTVSSSAFGNSTESSSSQSLLFPQESKPATTSSTTT
AATTPFVFGSGASTNNTGASGFGFGAPTTSSSAGSSFVFGTGSSAPSASPAFGASQTLTF
GQSQGANLPNPSAFGSLSSSTLFSATSQPPAPSFGAVSSSSQAPVFAQQPGQSTFGSGAA
PNASSIFQFGSSSTTNFNFTNNNPSGVFTFGANTSTPAASAQSSGSGTSAFIQASATFTV
GSNGKNLFSSGTSVHGRKIKTAVRRKK
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgggaaattggcgccgcggtcgccccgcgtgcgacgtcacgcgacgtgacgcacgtacg
cacgcgcgcgccagactggctcgcgagcccggcgcggccttagcagaggcgccacaagag
gcagcaggaggcggcgacgacggcggcggcggcggcttttttccccgtaactacggcagt
caatttggggtgacggaagaagaacccccctcaagtagccggctaggcagaccgtcagtg
acacacacggaggagggaggcggaagtgcggacgctcgctcgtgtgtgcgcgcgcagccc
ccgagccgcgtacggagtctcgcgaggtctcgcgtggtttgcgcccccaccgcgcctccg
ccgccaccgccgccgccgccaagggtcgcgtcttctcgcccctaccgcgcaagttctcgc
gagagtccgcggcgaggcgaggcccggcgcggcgcggcgcggcgcgacttgagacgcgac
ttgcgacgcgactggactggacgcggcgcgcggtcggctgagggggccgcgccgcgcctc
gcttcgcctcgggggggtctcggcgggcgggcgggggcgggcgctcggcgtctcccgccg
cctctgcccgcgcccgccatggcctccggggccggaggagccggagggggcgtcggcggc
ggcaagatccgggcgcggcggtgccacccggggcccgtgaagccctaccagcccggccgg
ccgcagccccgggcgcaggcgcagccgcaggtgagcgcggggccgggcgggcgggcgtgt
gtgtgtgtgttgcccctccgcgggccccggccggccgagcgcggaggccgggaccggaag
tggccgcggcggcggaggcccgggcgggatcgcggctcgcacgtgcgggcccgcagccgt
tttgcgggacgggctcctgcgctccctcgctcgctcgctcgctcacgcactcacacgcgt
ccactctcgctcgctcgcacatgcttttctgaaccccctttatgtttttcttcacaacag
ggcattcttagtagagttacagaatctgttaagaacattgtgccaggatggctgcaaaga
tacttcaataagaatgaagatgtatgtaactgttcaacagatacaagagaggtagcacag
tggtcggaaaatagagaaggtgaccacctcgtctatgctgatgaggagaactcaaatatt
catgatgggagaatcactcctgagccaacagtcagtaatacggaagagccctcaacaacc
agtactgcttcaaattatccagatgtattaacaaggccttctctacatcggagccatttg
aatttctctatgttggaatctccggcattacactgtcagccctctacgtcctcggcattc
ccaattggcagttctggtttttcccttgtgaaagaaattaaagattctacctctcagcat
gatgatgataacatctcaacgactagtgggttttcttcaagagcgtctgataaagacatc
gctgtgacaaagaacacttcagtgccacctctgtggtccccagaggctgaacgttctcat
tcactgtcacagcacactgccaccagctcaaagaaaccagcattcaatttgtctgctttt
gggacgctctccccttctcttgggaactcaacccttaaaacaagtcagcttggagattct
cccttttatcctggaaaaacaacttacggaggggccgcagctgctctgagacagcctaaa
ctgcggaactcaccataccaggcaccagtcagaaggcagatgaaagctaagcaactcaat
gcgcagtcctatggggtgaccagtacaacagcccggagaatattgcagtctttagagaag
atgtccagcccgctagcggatgcaaaaagaattccatctgttgtttcttctcccttcaat
tcaccccttgataggagtgtgattgatgccaccacagattttcaggccaaaagagaaaag
gtggattctcattaccctcctgttcagagactcttgacccctaaaccattgtccatagca
acaaatagaacggtttattttaaaccatctctgaccccatctggtgaattaaagaagact
aatcaaagaatagataaaaagcacagtattggatatgaaaaaaatacgacaacagggcaa
aatagagaacgggaaagtagcttttcttacccaaatttcagtacgcctgcagccaatggt
ttaccttctggaataagtagtggaggtggcaagatgaggcgggagcgaatacactttgct
gcagctaaagttccagaagaggaggaaatggaagtaccagtattaccgaaaatctccctg
cccatcactagttcttcactccctaccttcaacttcagttcatctgtgatcacaacttct
tcttcacccattgcttcttcacagtcattaacaaacaagcaggtacaaatgacttcttca
aatagcactggcagtcctatgtttagattttcatctccaattgtaaagtctactgaggca
gatgaactacctccatcatctattgggtttacatttagtgttcctgttgctaaaacaact
gaactttctggctctgggaatgattcagaaccaattccaagtagttcagctcaagatata
cctacaatgaacagtaatagctgtaagaagctaagtgaagattatgaaggcccttttaaa
cctgcaaaggttatgaaagagggaaatatcgtagatactcagaagttctctggcttttca
tcaccgaagacagagtcttttgctgctcagcctaccaccacaagtccagtagtttataca
agaccagcaataagtagcttttcatctagtggaattggatttggggaaagtttaaaagat
ggatccatgtggcagtgtcatatttgtctagtccagaataaagttacagacagcaagtgc
ttggcttgtcaagcaacaaaattatcaaaggatactgctaaacagactggaattggaaca
tcaagtaaaaattgcaaaccagctccttctgcatcagggacaggctttggagacaaattt
aaaccagcagtaggaacttgggattgtgatacttgcttagtgcaaaataaaccggaagcg
atcaaatgtgtggcctgtgaaacaccgaaacctggaactggtgtgaagcgagtcctcaca
cggccagtatcttccgaaagttctgtgactgtggctactacgtctttcagctccactgtg
accactggaaccttaggatttggtgataaattcaaaaggcctgtgggatcttgggagtgt
ccagtgtgctgtgttgttaacaaagcagaagataataaatgtgtgtcctgtatgtccgag
aaaccaggaacttcagtacctgcttcaagtagcagcactatccctgtttctcaggcttct
ggagtcttttcaggattcgataaattcaagaaacctgaggggagctggaactgtgatgta
tgccttgtgcagaatgaagcatttcgcaccaagtgtgcagcgtgtgaaagtgcaaaacca
ggcacacagtcagagttgaaaggctttggtacatcttcctcctcatcgaattcaggcgcc
tcagccttcaaatttggtcttccatcgacctcttctgggctccctcagactgtatcaaat
actggaacttttaaattcggagatcaggaagccttcaaaataggtgtgtcatcagattct
ggtcctgtaaaccctgtgggtgaaagctttaaattttcaaaaccaatgggagattttaaa
attggaatttcacccgatcttaaacctgaagaagctaaagagagtaagactgaagttaat
tttaagtttggaattcctgcttcttcaagcaacccatcttctgcaactccatttcagttc
ggggtctctaatctcgggcagcaagaaaagaaagaggagctgtctaaatcttcagctgca
tccttcagctttggtacagcgactgtgaacaccaccttgacctctgagaatcagagcaac
tgcagctttggaaccctagaaaccaagagtgtttcagcagctcctttcacatgtaagaca
ttggaagccaaaaaagaagaaatgcccactgccaaaactgggttcacttttggcaagacg
gaaccttcccccctgccacctgcctcattgtttgctttgggaaggacagaagaaaaacag
caagagcctgtcacttctacttctctggtgtttgggaaaaacaccgataatgaagaacca
aagtgtcagccagtgttttcctttgggagttccgagcaaaccaaagacgagaatccttca
aagtcaaacttcagtttcagtatagcaaaatcatctgagaaggaatctgaacagccaacc
aaggccacatttgcttttggagttcaaaccagtaccacagctgatcaaggtgctggaaag
caaggctttagttttttgaacagcaattcctcgaattccagtacaacagctacttcagcc
gttggtggtctgtttggtggcgccacctcctccaatgcgcctgggactgcctttctgttc
agccaggccagcagtacagtgagcagctctgcctttgggaactcgacagaatccagttca
tctcagtctttgctgtttcctcaagagagcaaacctgcaaccacctccagcacaactaca
gctgccaccaccccgtttgtcttcgggtcaggagccagcactaataatactggagcctct
ggctttggctttggcgccccgactacatcgagctctgcaggatcctcctttgtcttcggc
actgggtcttcagcaccatctgcaagtccagccttcggtgctagccagaccctgacattt
gggcaaagtcaaggtgccaacctgcccaatccttccgcttttgggtccctgtcatcatcg
accttgttctctgccacctctcaacccccagcaccttctttcggcgcagtgtccagcagt
agccaggcgcctgtgttcgcgcagcagcccggccagtctacctttggctctggagcagct
cccaatgccagctccattttccagtttggcagcagcagcacgacaaatttcaacttcaca
aacaacaacccatcaggagtattcacgtttggtgcaaatacaagcacacctgcagcctca
gcccagtcctcgggctctggaacctctgcatttatccaggcttcagcaacgttcactgtg
gggtcaaatgggaaaaatctattctcttctggaacttcagttcatggtcgcaagataaag
actgctgttagacgcaagaaataa
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integrated database retrieval system
