Suncus etruscus (white-toothed pygmy shrew): 125995833
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Entry
125995833 CDS
T09902
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125995833 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
125995833 (NHLRC1)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125995833 (NHLRC1)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125995833 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
FYVE
Vgb_lyase
FYVE_2
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
125995833
NCBI-ProteinID:
XP_049620764
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All DBs
Position
18:complement(47868613..47869821)
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AA seq
396 aa
AA seq
DB search
MGAEGAGSRRALRDLLQEAESSLLECQVCFERFDFAVARRPRSLPCGHVVCASCVDTLAH
RGRAGAQLECPFCRGTCPVSGARDCLPVLQLLELLASSSQPVLHPRIACKSDPRVFGGWG
TLVNPKGLALCPQTRRIWVLHEGQDKLKSFHFGGTHARQTTRGQGFLKYPLDVTICSKGH
VVVTDAGDRAVKIFQAQSGCCQLVLGTQFSLPWGVAATPEDQILVTDAEAGTLQRLDVDF
RTGVLQACIQLLGGLCGPRAVAVCASSGAVAVLECPLALQARNCNSSSTTLKVFDAQMQL
LALLDTLGFSLFLPTQISMSAVAFDHQGNVVVAETRGPAVLCLGKPNDLPVLRPLVIQGL
ARPVALAFTKQDSLLVLDSETHSVKIYGMEDDDNGE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggaaggcgcggggagccggcgggccttgcgggatctgctgcaagaggcggag
agcagcctgctagagtgccaggtgtgcttcgagcggttcgatttcgccgtggcaaggcgg
ccgcgcagcctgccctgtggccatgtggtgtgtgcgtcctgcgtggacaccctggcgcat
cgggggcgagcaggggcgcagctcgagtgtcctttctgcagggggacctgcccggtttcg
ggggcccgcgattgcctgccggtgctgcaactcctggagctcctggcatcctcctcacag
ccggtgctgcacccccggattgcttgcaaatccgatccacgcgtgttcgggggctggggg
actttggtgaaccccaaggggttggcgctgtgcccccaaaccaggcggatttgggtgttg
catgaaggccaggacaaactcaagagtttccactttggggggacccacgcgcgacaaacc
acgcgtggacagggcttcctcaaataccctctggatgtcactatctgtagcaaaggccac
gtagtggttacagatgcgggggaccgagctgtcaaaatctttcaggcccagagtgggtgc
tgccagctagtgctgggcacccagttctccctgccttggggggtggcagccaccccagag
gatcagatcctggtgacagatgcagaagcggggaccctacagcgcctggatgtggacttc
aggacaggggtgctccaagcttgcatccagctgctggggggcctgtgtggtcccagggct
gtggctgtgtgtgctagcagtggggctgtggccgtgctggagtgtcccctggccctgcag
gcacgcaattgcaacagcagtagcaccaccttgaaggtgttcgatgcccagatgcaactt
ctggccctgctggacactttggggttcagtctcttcctccccacccagatctccatgtct
gcagtggcttttgaccatcaggggaacgtggtggtggctgagactcgaggccctgccgtg
ctgtgcttgggaaaacccaatgacttgccagtcttgaggcctctggtgatccagggcctg
gctcgtccagtggctttggccttcaccaagcaggattcgcttctagtcctggacagcgag
acacattcggtgaagatctatgggatggaagatgatgataatggagaatga
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integrated database retrieval system
