Suncus etruscus (white-toothed pygmy shrew): 125995878
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Entry
125995878 CDS
T09902
Symbol
TRIM27
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
125995878 (TRIM27)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125995878 (TRIM27)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125995878 (TRIM27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Sina_RING
TRAF6_Z2
zf-RING_6
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
125995878
NCBI-ProteinID:
XP_049620795
LinkDB
All DBs
Position
18:complement(57473392..57488159)
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AA seq
520 aa
AA seq
DB search
MAAASVSVAECLQQETTCPVCLQYFAEPMMLDCGHNVCGACLARCWGAAEATVSCPQCRE
TFARRLVRPNRHLANVTQLVRQLRAERPAGPGAAGPGGGMGACDKHREPLKLYCEEDQTP
ICVVCDRSREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLS
LTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLI
AQLEEKQQQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQ
FTEKMQSDMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPER
FNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWY
GKEYWALTSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPY
FSLSYSGGKSAAPLIICPRSGIDGFSGHVGNPGHSMETSP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgagcgtgagcgtggcggagtgcctgcagcaggagacgacgtgcccggtg
tgcctgcagtacttcgccgagcccatgatgctggactgcggccacaacgtgtgcggcgcg
tgcctggcgcgctgctggggcgcggccgaggccaccgtgtcgtgcccgcagtgccgcgag
acgttcgcgcgccgcctggtgcggcccaaccgccacctggccaacgtgacccagctggtg
cgccagctgcgcgccgagcggccggccgggccgggcgcggcggggccgggcggcggcatg
ggcgcctgcgacaagcaccgcgagccgctcaagctctactgcgaggaggaccagacgccc
atctgcgtcgtgtgcgaccgctcgcgcgagcaccgcggccacagcgtgctgccgctcgag
gaggccgtcgagggcttcaaggagcaaattcagaaccagctggaccatctcaagagagtg
aaagatttaaagaagagacggagggctcaaggggagcaggcgcgagctgagctcttgagc
ctcacacagatggagcgggagaagatcgtgtgggagttcgagcagctctaccactctctc
aaggaacacgagtaccgcctgctggcgcgcctcgaggagctggacttggccatttacaac
agcatcaatggtgccatcacccagttctcctgcaacatctcccacctcagtagtctcatt
gcacagttggaggagaagcagcagcagcccacgcgggagctcctgcaggatatcggggac
acattaagcagggctgagagaatcagaatcccagaaccttggatcacacctccagatcta
caagagaaaatccacatttttgcccagaaatgcctattcttgacagagagcctaaagcag
ttcacagaaaaaatgcagtcagatatggagaaaatccaagaattgagagaggctcaatta
tactcagtggatgtgacgctagatcccgacacggcctacccgagcctcatcctctccgac
aacctgcggcaagtgcgctacagctacctgcagcaggacctgccggacaaccctgagcgc
ttcaacctcttcccttgtgtcctgggctcgccctgcttcatcgccggccgccactactgg
gaggtggaggtgggcgacaaggccaagtggaccatcggcgtgtgcgaagactcggtgtgc
aggaagggcggcgtgacctcggccccccagaatgggttctgggcggtgtccttgtggtac
gggaaggagtactgggccctcacctcgccgatgacagccttgcccctgcggaccccgctg
cagcgcgtgggcatattcctggactacgacgcgggagaggtctccttctacaacgtcact
gagcgctgccacaccttcaccttctctcacgccaccttctgcgggcccgtgcgcccctac
tttagcctcagctactcagggggcaagagcgcggcccccctcatcatctgccctcggagt
ggcatcgatggcttttctggccacgtcggtaatcctggccattccatggagacctccccg
tag
DBGET
integrated database retrieval system
