Suncus etruscus (white-toothed pygmy shrew): 125995972
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Entry
125995972 CDS
T09902
Symbol
TFEB
Name
(RefSeq) transcription factor EB
KO
K15590
transcription factor EB
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04020
Calcium signaling pathway
setr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125995972 (TFEB)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125995972 (TFEB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
125995972 (TFEB)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
125995972 (TFEB)
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SSDB
Ortholog
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GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
125995972
NCBI-ProteinID:
XP_049620876
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All DBs
Position
18:complement(924662..977616)
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AA seq
472 aa
AA seq
DB search
MASRIGLRMQLMREQAQQEERRERMQQQQAAMHYMPQPPQLPPTPAINTPVHFQSPPPVP
GEVLKVQSYLENPTSYHLQQSRDQKVREYLSETYGNKFAAHISPAQGSPKPLPAASPGVR
AGHVLSSSAGNSAPNSPMAMLHIGSNPEREFDNMMCLDNVLGFINPEAQMPNTLPLSSSH
LNVYSSDPQVTASLVGVTSSSCPADLTQKRELSDAESRALAKERQKKDNHNLIERRRRFN
INDRIKELGMLIPKANDLDMRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNK
QLWLRIQELEVQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEDPTEALLLGAEVPDSE
PLPALPPQVPVPPPVQPAQPAQPPSPFHHLDFSQSLSFGGGGDEGPSSYPEPLGPEHGSL
FPTLSKKDLDLMLLDDSLLPLTSDPLFSTMSPEASKASSRRSSFSMEEGDML
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcattgggctgcgcatgcagctgatgcgagagcaggcgcagcaggaggag
cgacgggagcgcatgcagcagcagcaggcggccatgcactacatgccgcagccgccacag
ctgccacccaccccggccatcaacacgcccgtccacttccagtcgcctccacctgtgccc
ggggaggtgctgaaggttcagtcctacctggagaaccccacctcctaccacctgcagcag
tcccgggaccagaaggtgcgggagtacctgtctgagacctacgggaacaagttcgctgcc
cacatcagccctgcccagggctcccccaaacccctgccagccgcttcccccggggtgcgg
gccggacatgtgttgtcttcctctgccggcaacagcgctcccaacagccccatggccatg
ctgcacattggctccaaccctgagagggagttcgacaacatgatgtgtctggacaacgtc
ttgggcttcatcaatccggaagcgcagatgcccaacacgctgcccctgtccagcagtcac
ctgaacgtgtatagcagtgaccctcaagtcacggcctcccttgtgggcgtcaccagcagc
tcctgcccagcagatctgactcagaaacgagagctctcagatgcagagagccgggcactg
gccaaggaaaggcagaagaaagacaaccacaatctgatcgaaaggaggaggaggttcaac
atcaacgaccgcatcaaggagctgggaatgctgatccccaaggccaatgacctagacatg
cgctggaacaagggcaccatcctcaaagcgtccgttgactacatccgaaggatgcagaag
gacctgcagaagtcccgggagctagagaatcactcccggcgcttggagatgaccaacaag
cagctttggctgcgcatccaggagctggaggtgcaggcgcgtgtccatggcctccccacc
acctccccgtcaggcatgaatatggcggagctggcccagcaggtggtgaagcaggagctg
cccagcgaggaagacccaacggaagccctgctgctgggggctgaggtgcccgactccgag
cccctgccggctctgcccccccaggtcccagtgcctccaccagtccagcccgcccagccc
gcccagccgccatccccgttccaccacctggacttcagccagagcctgagtttcgggggc
gggggcgacgaagggccctccagctacccggagcctctggggcctgagcatggctccctg
ttccccaccttgtccaagaaggatctggacctcatgctcctggacgactctctgctcccg
ctcacctccgaccctctcttctccaccatgtcccccgaggcctccaaggccagtagccgc
cggagcagcttcagcatggaggagggggacatgctgtga
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