Suncus etruscus (white-toothed pygmy shrew): 125995996
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Entry
125995996 CDS
T09902
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125995996 (CARMIL1)
Membrane trafficking [BR:
setr04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125995996 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Spectrin_5
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
125995996
NCBI-ProteinID:
XP_049620899
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All DBs
Position
18:54810660..55154503
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AA seq
1371 aa
AA seq
DB search
MAEESSAVPRELLESIRDVIGRKIKISVKKKVKLEVKGDKVENKVLVLTSCRAFLLTARI
PTKLESTFSYLEIHGVTCHKPTQMVVETEKCGLSMKMASPEDVNDVLAHIGTCLRRIFPG
LSPLRILKKVSMEPSERLANLQALWDSQTVPEQGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSSDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLTNALAHNPNSGLHTINLAGNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLSHLDLSGNILRGDDLSYMYNF
LAQPNAIVHLDLSNTECSLDMVCGALLRGCLQYLAVLNVSRTVFSHRKGKEVPLSFKQFF
SSSLALVQINLSGTKLSPEPLKALLLGLACNHNLKGVSLDLSNCELRSGGAQVLEGCIAE
IHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPMYDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCAGDAVQEDLKSA
ERLMRDAKNSKTLLPNLYHVGASWAGASNLSFNPIQETLESMAGEVTRVVDEQLKALLES
MVDAAEDLCPNVMKKANIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLTV
ASFLADRIVDEILDALSNCHHKLADHFNRRGKVLPHQESLEIELAEEKPVKRSVITVEEL
TELERFEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPSI
RQEKRSSGFIFELPSEEGRKLEHFTKLRPKRNKKQQPTQAAVRTMSLVSQDGEQNGLMGR
VDEGVDEFFTKKVTKMDSKKLSTKGSETQELGDGGDEKKKRDSRKSGFLNLIKSRSKSER
PPTVVMPEEPSSPKGVARSPAADTPRKEAKPAERNGSSERIEEPRSPDFLDDSLGEEGGR
MERNDSRNSPQGGRRYGVQMMGSGLLAEMKAKQERRAASAQKKLGNDTVSMDPFSLAQNT
ERLDGGGAVPKLHAGLPESRFGSGTPEKNAKAEPRVEAGCRSRNTSATPTSPKPLLQSPK
PSLAARPSIPQKPRSSSRPEDIPDSPTGPSSPKVALLPPILKKTSSDKDKEIQNSPQPSP
RTITQEASRVSWGYQVLESQEQKLCSSNRDGLQSSKSSDSGEEAEKDFIFV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagagctccgcggtgccccgcgagctgctagaaagcatacgggatgttatt
ggcaggaaaatcaagatttcggtgaagaagaaggtcaagctggaagtgaagggagataaa
gttgaaaacaaagtgctggtgcttacatcatgccgggccttccttttgacagctcgaatt
cccaccaagctcgagtcgaccttcagctacttggagattcatggcgtgacctgccacaag
ccaactcagatggttgtggagacggagaagtgtggcctgtccatgaagatggcttcgcct
gaggatgtgaatgatgtcttggctcacatcggcacctgcctccggaggatcttccccggc
ctgtccccactgaggatcctgaagaaagtgtccatggaaccatctgagcgactggccaat
ctccaggctctgtgggacagccagacggtacccgaacaaggcccctgcggcggattttct
cagatgtatgcctgtgtttgcgactggcttggattttcctatcgggaagaggtacagtgg
gatgtggatacgatttacctgacgcaggacaccagggaattgaatttgcaggactttagc
caccttgatcacagggacctaatacccatcatcgctgccctggagtacaatcagtggttc
acaaagctgtcctcgaaggatctcaaactttctagtgatgtctgtgaacagatcttgcga
gtggtgagtagatctaatcgactggaggaattggtgttggaaaacgctggacttaggaca
gattttgcacaaaaactcaccaatgctctagcgcacaatcccaactctggcctgcacacc
atcaaccttgctgggaatccactagaggaccgaggtgtgtcctctctaagtattcagttt
gccaaactccccaagggattgaagcatttaaacttgtcgaaaacgtcattgtcacctaaa
ggggtgaacagcctttctcagtcactcagtgccaacccgctgaccgcttccaccctcagc
cacctagacctctcagggaatattctccgtggagatgacctctcgtacatgtacaacttt
ctggcccagccaaatgccattgtacatttggacttatccaatactgaatgttccttggac
atggtctgtggagctcttctccgtggctgccttcaatatttagctgtgctcaatgtttcc
agaacggttttctctcaccggaaaggaaaagaagtgcccctgtctttcaagcagtttttc
agtagttctttggccctggtgcagatcaacctctcaggcacaaaactgtctcctgaacct
ctaaaagcactgctgctgggcctggcttgcaaccataacttgaagggcgtctctttggat
ctcagcaattgtgagctgagatcaggaggtgctcaagttttggaaggctgtatcgccgag
atccacaatatcaccagcttagacatctctgacaatggtctcgaatcggacctatctacc
ttaatagtgtggctcagtaaaaacagatcaatacaacacttggcattaggcaaaaatttt
aataatatgaaatccaaaaatctgacaccggtgttggacaacttagtacagatgattcag
gatgaagaatcacccctgcagtccttgtccctggccgactccaagctcaagactgaggtc
accatcattattaatgccctgggaagcaacacgtccctgaccaaagtggacatcagcggg
aatgcaatgggggacatgggggccaagatgcttgccaaggcgctgcagatcaacaccaag
ctcaggactgtcatatgggacaagaacaacatcactgcacagggcttccaagatatcgct
gtcgctctggaaaagaactacacattgagatttatgccgattcctatgtacgatgcttct
caagccctgaaaacgaaccctgagaaaactgaagaggccctgcagaagatagaaaactat
ctgcttcgaaatcatgagacaagaaaatatctccaggagcaggcttatcgccttcagcag
ggcatcgtcaccagcaccacgcagcagatgattgacagaatatgtgtgaaagttcaagat
cacctcaactctttacgaaattgcgcgggggacgctgttcaggaagatttaaaatctgca
gagaggctcatgcgtgatgctaagaactctaaaacgttgttaccaaatctgtaccatgtt
ggtgcatcttgggcaggagcgagtaatttgtccttcaatccaattcaggagactctggaa
tcaatggccggagaagttaccagagttgtagatgagcaactaaaggctctgctggaatcc
atggtagatgctgcggaagacctctgtcctaatgtgatgaaaaaagccaacattcgccaa
gacctcattcacgccagcaccgaaaagatatccatcccccggacctttgttaaaaatgtc
ctgctggaacaatctggaatcgatatcctgaacaagattagtgaagtgaagctgacagtg
gcctcctttctggctgatcgaattgtggatgaaatcctggatgccctttcaaactgccac
cataaactggctgaccatttcaacaggcgtggcaaggtccttcctcaccaggagtccttg
gagatcgaactggcagaggagaagccagtgaaacgctctgtcatcactgtggaggagctc
acagagctagagcgcttcgaagatctggacacttgtatgatgactcctaaatccaaaagg
aagagcatccatagcagaatgctacgaccagtttccagggcctttgaaatggagtttgat
ctagataaggctctggaagaggtgcccattcacattgaagacccgcctttcccatccatc
agacaagagaagcggagctcaggattcatcttcgagttgccctcggaggagggaaggaag
ctggagcactttaccaagttgaggcccaagcggaacaagaagcaacagccgactcaagca
gcggtccggaccatgagcctcgtctcccaagatggcgaacagaatggacttatggggaga
gtggatgaaggtgtagatgaatttttcaccaagaaggtgaccaaaatggattccaagaaa
ttgtctaccaaaggctccgagacccaagagttgggggacgggggagatgagaagaaaaag
cgagattctcgaaaaagtggcttcctcaacttgatcaagtccagatccaagtcggagcgg
ccccccacggtcgtgatgcccgaagaaccctcatccccaaaaggggtggccagaagccca
gctgcggataccccgcgcaaggaggccaagccggctgagcgcaatggcagttctgagcgg
atagaggagcccaggtcccctgatttcctggacgacagtctcggagaagaggggggcaga
atggagcgcaatgacagcaggaacagcccccagggaggccggcgctatggggtgcaaatg
atgggcagtgggctgctggcggagatgaaggccaagcaggagaggcgagctgcgagcgcc
cagaagaagcttgggaacgatacagtctccatggatcctttcagcctggcccagaacacg
gagcggttggatggaggcggggcagtgcccaaactgcatgcagggcttccagagagccgc
tttggttcggggacaccagagaagaacgccaaagctgagcccagagtggaggcgggctgc
aggtcccggaacacctccgccacccccaccagccccaagcccctgctgcagtcacccaag
cccagcctggcagcccggcccagcatcccacagaagccgagaagctcctcgaggccggag
gacatcccggactctcccactggtcctagttcacctaaagttgctcttcttcctcccatc
ctgaaaaaaacctcttcagacaaggacaaggagatccagaacagccctcagcccagtccc
aggactatcacccaggaagcttccagagtaagctggggttatcaggtcctggagagtcaa
gaacaaaagctgtgctcctccaatagagatggccttcaaagcagcaaatccagtgactct
ggggaagaagcggaaaaagattttatttttgtgtag
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