Suncus etruscus (white-toothed pygmy shrew): 125996384
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Entry
125996384 CDS
T09902
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125996384 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
125996384 (DHX16)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125996384 (DHX16)
Spliceosome [BR:
setr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125996384 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
nSTAND3
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125996384
NCBI-ProteinID:
XP_049621282
LinkDB
All DBs
Position
18:complement(33631828..33662233)
Genome browser
AA seq
1043 aa
AA seq
DB search
METPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEAFVQRLRDTDTLDLSGPAR
DFALRLWSKVPRKVVVEKPARAAEREARALLEKNRSYRLLEDSEESGEETIGRADNSQQK
KRKKRKHLRKKHQEEEEEEEEEVSEKKKKTGGNAQQTEKPESEDEWERTERERLQDLEER
DAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKR
EREKLEDLEAELADEEFLFGDVELSRHEQRELKYKKRVRDLAREYRAAGEQEKLEATNRY
HMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAAAQEPKYQLVLE
EEETIEFVRATQLQGDEEPSAPPVPTQAQQKESIQAVRRSLPVFPFREELLAAIADHQVL
IIEGETGSGKTTQIPQYLFEEGYTRNGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVG
YSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMIDEAHERTLHTDILFGLIKD
VARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVS
VLQIHVTQRPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIPELLVLPIYANLPSDMQAR
IFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKAS
ANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLIHF
DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSE
EILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWC
YENFVQFRSMRRARDVREQLEGLLERVEVSLSSCQGDYIRVRKAITAGYFYHTARLTRSG
YRTVKQQQTVFIHPNSSLFEEMPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKA
KELEDPHAKKMPKKLGKTREELG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggagacgccggcggggctggagcgctgggtgcaggacgagctgcactcggtgctgggg
ctgagcgagcggcacgtggcccagttcctcatcgggaccgcgcagcgctgcgcctcggcc
gaggccttcgtgcagcgcctcagggacaccgacaccctcgacctgagcgggccggcgcgc
gacttcgcgctcaggctctggagcaaggtaccacggaaggtggtagtagaaaagccagct
cgggcagctgagcgagaggcccgagctttgctggagaagaatcgatcttacaggttgctg
gaagatagtgaggagagtggtgaagagactataggtagggctgacaatagtcagcagaag
aagcggaaaaagcgaaaacacctcaggaagaaacatcaggaagaggaggaagaagaggag
gaagaagtcagtgagaaaaagaagaagacaggggggaatgctcagcagacagagaagcca
gagtcagaggatgagtgggagcggacagagcgagagcgtctccaggacttggaagaacgg
gatgcttttgctgagcgagttcggcagcgtgacaaggatcgaactcgcaatgtcttggag
cgatcagacaaaaaggcttatgaagaagctcagaagcgcctcaaaatggctgaggaagac
cggaaagccatggtccctgagctgcggaagaaatctcgccgagagtacctggctaagcgg
gagcgggagaagcttgaggacctggaggccgagctggctgatgaggaattcctttttggg
gatgtggaactaagccgccatgagcagcgggagctcaaatacaagaagcgagtacgggat
ctggcccgggagtaccgtgcagcaggagagcaggagaagctggaggcgacaaatcgctac
cacatgccggaggagactcggggacagccagcacgagctgtggatctcgtggaggaggag
tccggcgcccctggagaggagcagcggcgctgggaggaagcccggctgggagctgcctcc
ttgaagtttggggcccgagatgctgctgcccaggagcccaaatatcagcttgtgctggag
gaagaggaaaccatcgagtttgttcgggccactcagctccagggtgatgaggaaccgtca
gctccaccggtcccaacccaggcacagcagaaagagtccattcaggctgtacgccgcagc
ctccctgtgttccccttccgtgaagagctcctggctgccattgctgatcatcaggtcctc
attattgagggcgagaccggctctgggaagaccacccagatcccgcagtatctctttgag
gagggttatacaagaaatggtatgaaaattgcctgcactcaacccaggagagtggcagct
atgagcgtggctgcccgagtggcccgggagatgggtgtgaaacttgggaatgaggttggc
tacagcattcgttttgaggactgcacgtcagagcgaactgttctccgctacatgactgat
ggcatgcttctccgggagtttctctctgagcctgaccttgcaagttacagtgtggtgatg
atagatgaggctcatgaacggactctccacacggacattctctttggtctgatcaaggat
gttgctcgcttccgacctgagctcaaggtcctggtggcttctgccactttggacactgcc
cgtttttccactttctttgatgacgcccccgtcttccgaatccctggacgcaggtttcca
gttgacatcttctatactaaggccccagaggctgactacctggaagcctgtgtagtgtct
gtgctccagatccatgttacccagcgccctggggacatcctggtgttcctgactggacag
gaagagattgaggcagcctgcgagatgctccaggatcgctgccgccgccttggatccaaa
atccctgagctcttggtgctgcctatttatgccaacctgccttctgacatgcaagctcga
atcttccagcccactcctcctggggctcggaaggtggttgtggcaacaaacatcgcagag
acctctctcaccatcgaaggcatcatttacgtgctggatccagggttctgtaagcagaag
agctataacccccgcacaggcatggagtcgctcaccgtcacaccctgtagcaaggcctca
gccaatcagcgagctggtcgggcaggtcgagtggctgctgggaagtgcttccgcctctat
actgcttgggcatatcaacatgagctggaggagaccactgtccctgagatccaaagaacc
agcctgggcaatgttgtgttgctgctgaagagcttaggaatccatgaccttatacatttt
gatttcttggatccaccaccatatgagaccttgttgctggctctggaacaactgtatgct
ttaggagccctcaaccaccttggggagcttaccacgtctggtcgaaagatggcagagctt
cctgtggaccccatgctatctaaaatgatcctggcctctgagaagtacagctgttcagaa
gagatcctgacggtggctgccatgctttctgtcaacaattcaatcttctacaggcccaag
gacaaagttgtccatgctgacaatgcccgtgtcaactttttccttccgggtggggaccat
ctggttctgcttaatgtttatacacagtgggctgagagtggttactcttctcagtggtgc
tatgaaaacttcgtacagttcagatcaatgcgccgagcgcgggatgtacgcgaacagttg
gaaggacttttggaacgtgtggaagtcagtctcagttcctgccagggggactatatacgt
gtacgcaaggccatcactgctggttacttttaccacacagcaaggttaacacgcagcggc
tatcgaacagtgaaacagcagcagacagtgttcattcatcccaactcatctctctttgag
gaaatgccacgctggctgctctaccatgaacttgtcttgactaccaaggagttcatgaga
caggtactggagattgagagcagttggcttctggaagttgctccccactattataaggcc
aaggaactagaagatccccatgctaagaagatgcctaaaaaattaggcaagacacgagaa
gagctaggataa
DBGET
integrated database retrieval system
