Suncus etruscus (white-toothed pygmy shrew): 125996498
Help
Entry
125996498 CDS
T09902
Symbol
TRIM25
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04064
NF-kappa B signaling pathway
setr04622
RIG-I-like receptor signaling pathway
setr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125996498 (TRIM25)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125996498 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125996498 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
125996498 (TRIM25)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125996498 (TRIM25)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125996498 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
ANCHR-like_BBOX
RING_XB3-XBAT31
C5HCH
zf-B_box
U-box
Seadorna_VP6
Motif
Other DBs
NCBI-GeneID:
125996498
NCBI-ProteinID:
XP_049621425
LinkDB
All DBs
Position
1:176624744..176646693
Genome browser
AA seq
605 aa
AA seq
DB search
MAELCPLADELSCSICLELFNLPVTTPCGHNFCGSCLDETWAVQGAPYSCPQCRAVYRAR
PQLQKNTVLCAIVEQFTQAEVAQEALPEGWTPPLPPPAPXPVAPVTCDLCLKEAAVKTCL
VCMASFCQEHLKPHLNSPAFRDHPLQPPVSNLMLRKCPQHNRLRELFCPEHNQCICHVCL
VEHKTCSPLALAQASAQLEAKLKNKLSIIYGQINGAEVALEDVRSKQQMVQEAAQKKLEQ
VKKDFVDMKLLLEASEAGSTRKIVEEVKRVSNKFDSIYQILLKKQKEMRTTKEEIELALA
KGDELEFLEKAGKLQTVNTKSVYVPKVELNQELMKEVCQSSSELKNELKCCLKNFQDKKK
PEESTSSAAAAAASPSKAPTFGAPGQSLDPKQAHPDAAAQTLPTQPNLNVLKMKVLEAFL
AKRRAELMEYATKVILDYNTVHIKVVLSENYTVATAVDLPQKYHPHPQRFLYECPQVLGL
HCYKKGVHYWEVELHNNSFCGVGICYGRMDRQGTQSRLGRNNVSWCVEWFNSEISSWHNN
VKKTLPPTKAKRVGVLLNCDYGFVIFFAVTEKLHLLYKYRVDFEEALYPAFWVFSAGTSL
SICSN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgtgtcccctggccgacgagctgtcgtgctccatctgcctggagctgttc
aacctgccggtgaccacgccgtgcggccacaacttctgcgggtcgtgcctggacgagacc
tgggcggtgcagggcgccccgtacagctgcccgcaatgccgcgccgtctaccgcgcccgg
ccgcagctgcagaagaacacggtgctgtgcgccatcgtggagcagttcacgcaggccgag
gtggcccaggaggcgctgcccgaaggctggacgccccccctcccgccgcccgcgcccnnc
cccgtggcccccgtgacctgcgacctgtgcctaaaggaggcggccgtcaagacctgtctg
gtgtgcatggcctccttctgccaggagcacctgaagccgcacctcaacagccccgctttc
cgcgaccacccgctgcagcctccggtcagcaatctgatgctccgaaaatgcccgcagcac
aaccgtctgcgggagctcttctgccccgagcataaccagtgcatctgtcacgtctgcctg
gtggagcacaagacctgctcgcccttggccctggcccaggccagcgcccaactggaggcc
aagctgaaaaataaactgagcatcatatatggccagatcaatggtgcagaggtggcgctg
gaggatgtgcgaagcaagcagcagatggtacaggaagctgcacagaagaagctggagcag
gttaaaaaagactttgtggatatgaagcttctcctcgaagcctcggaagccggctcaacg
cgaaagatcgtggaagaggtgaagagggtcagcaacaagtttgacagtatctaccagatc
cttctcaagaagcagaaagaaatgagaaccacgaaggaggagattgaacttgctctggcc
aagggtgatgagttggagtttctagagaaagcgggaaagctgcaaacagtgaacaccaag
tccgtctacgtgcctaaggtggaattgaaccaggagctgatgaaggaggtttgccagagc
tcctcagaactcaaaaacgaactgaagtgttgcctcaagaatttccaagacaagaagaag
ccagaggagtccaccagctcagctgctgctgctgctgcctcccccagcaaggcccccact
tttggagccccaggacaatcattggatccaaagcaagctcacccagatgctgcagctcaa
actttgcccacacagccgaacttgaatgttctcaagatgaaggtgctggaggccttcttg
gccaagagaagagctgaactcatggaatatgctactaaggtcattctggactataacact
gtacacatcaaggtggtactgtcagagaactacactgtcgcaactgcagtggacttaccg
cagaaataccatccacacccccagcggttcctgtacgagtgtcctcaggtgctgggcctg
cactgctacaaaaagggagtccactactgggaagtagaactgcacaataacagcttctgt
ggggtgggcatctgctacggtcgcatggaccgccagggtacacagagccgtctgggccgc
aacaacgtctcctggtgcgtggagtggttcaactcggagatctccagctggcacaacaat
gtgaagaaaaccctgccccctaccaaggccaagcgggtgggcgtacttctcaactgcgac
tacggttttgtcatcttcttcgcggtgacggagaagctccatctgctgtataagtaccgg
gtagactttgaggaggctctgtacccggccttctgggtcttctctgctggcacttctctc
tctatctgctccaattag
DBGET
integrated database retrieval system
