Suncus etruscus (white-toothed pygmy shrew): 125997278
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Entry
125997278 CDS
T09902
Symbol
CSF1
Name
(RefSeq) macrophage colony-stimulating factor 1 isoform X1
KO
K05453
macrophage colony-stimulating factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04010
MAPK signaling pathway
setr04014
Ras signaling pathway
setr04015
Rap1 signaling pathway
setr04060
Cytokine-cytokine receptor interaction
setr04061
Viral protein interaction with cytokine and cytokine receptor
setr04151
PI3K-Akt signaling pathway
setr04380
Osteoclast differentiation
setr04640
Hematopoietic cell lineage
setr04668
TNF signaling pathway
setr05010
Alzheimer disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125997278 (CSF1)
04014 Ras signaling pathway
125997278 (CSF1)
04015 Rap1 signaling pathway
125997278 (CSF1)
04668 TNF signaling pathway
125997278 (CSF1)
04151 PI3K-Akt signaling pathway
125997278 (CSF1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125997278 (CSF1)
04061 Viral protein interaction with cytokine and cytokine receptor
125997278 (CSF1)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
125997278 (CSF1)
09158 Development and regeneration
04380 Osteoclast differentiation
125997278 (CSF1)
09160 Human Diseases
09163 Immune disease
05323 Rheumatoid arthritis
125997278 (CSF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
125997278 (CSF1)
05022 Pathways of neurodegeneration - multiple diseases
125997278 (CSF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
setr04052
]
125997278 (CSF1)
Cytokines and neuropeptides [BR:
setr04052
]
Cytokines
CSF and other factors
125997278 (CSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
DUF1031
Motif
Other DBs
NCBI-GeneID:
125997278
NCBI-ProteinID:
XP_049621678
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All DBs
Position
19:28499123..28518169
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AA seq
541 aa
AA seq
DB search
MTARGAAGRCPPTTWLGSWLLLAGLLVSRSVAKEVPKTCSDMIGNGHLQELQKLIDSQME
TSCQIAFEFVDQEQLKDPVCYLKKAFFLVQDILEDTMRFKDNTPNAKVIVQLQELSLNLN
NCFTKDSEEHNKLCVRTFSETPLQLLEKIKNVFNETKHVLKNDWNIFSKNCNESFSKCSK
PDVVTKPDCNCLYPKATPSSDPASALPQQSLAPNKTPLASLSGADAQGMEDGSLLPSEQP
FHTTDPGSAKQRLPRSTCQSFETLEPLAVEGGPTGSSPQPDPGIEDILQSVMDANWALEE
ASGEMSEGPESQGTELSPSPGVGGVQAETADIDFNSATSPLPGSSEGQHLEDVPRTHLSS
VGSVRPTSQSLKHTPQKTDNAPTLLRDRLDPIETPTLLPPGLGSPSTLSAQPHLPRSPEL
PLGVLEGKRSTRDRRSPTELEGARAGAGSAWPPAWFNSVPLTDTGHGRQSSELPDPKLLG
FVFHFLVPSVILVLLAVGGLLFYRQKRRNHCQQPQTVESPVEQPEGSPLTQDTDRQVEAP
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcggggtgccgccgggcgctgccctcccacgacatggctgggctcctggctg
ctgctggctggtctcctggtgagcaggagtgtcgccaaggaggtgccaaagacctgtagc
gacatgattgggaacggacacctgcaggaactgcagaagctgattgatagtcagatggag
acctcgtgccaaattgcctttgagttcgtagaccaagagcagttgaaagatcctgtgtgc
tacctgaagaaggcatttttcctggtgcaggacattctggaggataccatgcgcttcaaa
gacaacacccccaatgccaaagttattgtgcagctccaggaactctctttgaatctcaat
aactgtttcaccaaggactctgaggaacataacaagctctgtgtccgaactttctctgag
acgcccctccagttgctagagaagatcaagaatgtctttaatgagacaaagcatgtcctt
aaaaatgactggaatattttcagcaagaattgcaatgagagtttttctaaatgctccaag
ccagatgtggtgaccaagcctgattgcaactgcctgtaccccaaagccacccctagcagt
gacccagcctctgccctccctcagcagtccctcgcccccaacaagacccctctggccagc
ttgagcggggctgatgctcaagggatggaggacggctccctcttgcccagtgagcagccc
tttcacacaacagatccggggagtgcgaagcagcgactccctaggagcacctgtcagagc
tttgagacgctggagcccctggccgtcgagggtggccccactggaagttcacctcagcct
gaccctgggatagaagatattctccaatcagtaatggatgctaactgggcactggaagag
gcctctggagagatgagtgagggaccggagtctcaaggaacagagctctcccccagtcca
ggggtaggtggtgtccaggcagagacagccgacattgactttaactctgcaacatctcca
cttcctggatcttctgagggccagcatctggaagatgtccccaggacacacctgtccagt
gtgggatctgtgagacccacaagtcagtccctgaagcacacaccccagaagacagacaac
gctcccacactgctcagagaccgcctggatcccattgagaccccgaccctcctcccacca
ggccttggcagtccttccactctttctgcccagccacaccttcccagaagccccgagctt
cccctaggggtgctggaaggaaagaggagcaccagggatcggaggagccccacagagctg
gaaggagcacgagcaggtgcaggcagtgcctggcccccagcatggtttaactcggttcct
ttgactgacacaggccatggcaggcagtcttcagaactccctgatcccaagctccttggc
tttgtcttccactttctggtacccagtgtcatcctggtcctgctggctgttggcggactt
ctgttctacaggcagaagcggcggaatcactgtcaacaacctcagacagtggagtctccc
gtggagcaacctgaaggcagccccctgacgcaggacacagacagacaagtggaagcgcca
gtgtag
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